Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 1e-11 >seq2 Length=4043926 Score = 84.2 bits (92), Expect = 1e-11 Identities = 196/290 (68%), Gaps = 8/290 (3%) Strand=Plus/Plus Query 25308 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 25367 || || ||||| ||| || ||||||||| |||| | |||| | ||| || || Sbjct 1045820 TGCGGCTCGTAGCCCAGCACCACGAAATCCTCCACCTTCCACCCGTCAATACTC-CCGCC 1045878 Query 25368 CT----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 25423 || ||| || ||| ||| | ||||| || ||||||| ||||| ||| ||| Sbjct 1045879 CTTCTCCCTCTTGATCTCCAGCTTCGGAAACTCCCTCGGCTCCCGCTCGACCTGCACCTT 1045938 Query 25424 CAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTG-GACAAACTCTC 25482 |||| || ||||| || ||| ||||| ||||| |||| ||| | | || | Sbjct 1045939 GAGCGCGTCCACGTGGTCGCAGTACACGTGCGCGTCGCCCATGACGTGCGTGAGGCTG-C 1045997 Query 25483 CCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGT 25542 |||| | || || ||||| || | ||||| |||||| || |||||||||||||| Sbjct 1045998 CCGGCACGAGGTCGCACACGTACGCGAGCATGTGCGTGAGCAGCGCGTAGCTGGCGATGT 1046057 Query 25543 TAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACA 25592 | ||||| || || | ||||| | | | || | ||||||||||| || Sbjct 1046058 TGAAGGGCACGCCCAGGCCCATAT-CGCAGGAGCGTTGGTAGAGCTGGCA 1046106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340136882841129