Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq25 116 3e-21 seq9 87.8 2e-12 >seq25 Length=380168 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| |||||| || || ||||| || | ||| || ||||||| |||| | ||| ||| Sbjct 212392 ACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCC 212333 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| | | |||||||| || || || || || ||||| | | Sbjct 212332 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGA 212273 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || | ||||||| | | | ||||| | || || || | |||||||| || Sbjct 212272 ATCTTGGACTTGACGTTGTCAATGGTGTCCGACGATTCAACTTCCAGGGTGATGGTCTTG 212213 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| || ||||| || ||||| Sbjct 212212 CCAGTAAGAGTCTTGACAAAAATTTGCAT 212184 Score = 109 bits (120), Expect = 5e-19 Identities = 168/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || || | || |||||||||| |||||| || || ||||| || | Sbjct 212195 AAAAATTTGCATACCACCACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGAT 212136 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| || ||||||| ||| | ||| |||| ||| || || | ||||| | | || Sbjct 212135 GTTGTAGTCGCTCAGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTG 212076 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||| || || ||||| || || ||||| | || || | ||| || ||| ||||| Sbjct 212075 CTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTC 212016 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | |||||||| |||||||| ||||| || || ||||||||||| Sbjct 212015 GGAAGACTCCACCTCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGC 94861 ||| | ||| || ||||| || | ||| || ||| | |||||| ||||| ||| Sbjct 211703 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGG--AGAGTGTTCTTCCGTCCTCGAGC 211646 Query 94862 TGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATT 94921 || || || | ||||| | | |||||||| ||||| ||||| || ||||| | || Sbjct 211645 TGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATC 211586 Query 94922 TTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCA 94981 || ||||||| | ||| ||||| | | ||||| |||| |||||||| || || Sbjct 211585 TTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCC 211526 Query 94982 GTAAGAGTTTTCACAAAGATCTGCATG 95008 || || || || || |||||||||||| Sbjct 211525 GTCAGGGTCTTGACGAAGATCTGCATG 211499 >seq9 Length=1091098 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || | || || || ||| | ||| | || || ||||| || | ||| || || Sbjct 140798 CCACCACGCAGTCTCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 140739 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | |||||| ||||| || ||| | ||||| | | ||||| || || ||| Sbjct 140738 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 140679 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || || | ||||||| | ||| |||||| | || || Sbjct 140678 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGACGACTCCACC 140619 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 || | ||||| || || || || || || ||||| |||||||||||| || Sbjct 140618 TCGAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATGATT 140568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290230570280