Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq10 104 4e-18 seq1 95.1 2e-15 >seq10 Length=1006374 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| ||| || || |||||||| || ||||||||||| || || Sbjct 205494 GCCAAGCGTCACCGCAAGAT-TCTGCGTGACAACATCCAGGGCATCACCAAGCCTGCCAT 205552 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| | |||| Sbjct 205553 CCGCCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 205593 >seq1 Length=4328376 Score = 95.1 bits (104), Expect = 2e-15 Identities = 83/101 (82%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| ||| || || |||||||| || ||||| ||||| || || Sbjct 3576923 GCCAAGCGTCACCGGAAGAT-TCTGCGTGACAACATCCAGGGTATCACAAAGCCCGCCAT 3576865 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 | | ||||| |||||||||||||| ||||||||| |||||| Sbjct 3576864 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 3576824 Score = 82.4 bits (90), Expect = 1e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 16530 CTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCC 16589 ||| | || |||| || |||| ||||| || ||||| ||||||| || || |||| Sbjct 3576760 CTGCAGTGATCTACGAGGAGACTCGTGGAGTCCTGAAGTCCTTCCTCGAGGGTGTCATCC 3576701 Query 16590 ATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCG 16649 ||| ||| || || || |||||||| || || ||||||||||| || | ||| ||| Sbjct 3576700 GTGACGCTGTCACATACACTGAGCACGCCAAGCGCAAGACTGTCACTTCTCTCGATGTCG 3576641 Query 16650 TCTATGCATTGAAACGTCAAGGCCG 16674 |||| || | || || || ||||| Sbjct 3576640 TCTACGCTCTCAAGCGCCAGGGCCG 3576616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075041824889