Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq22 187 3e-42
seq3 102 1e-16
>seq22
Length=534521
Score = 187 bits (206), Expect = 3e-42
Identities = 481/730 (66%), Gaps = 16/730 (2%)
Strand=Plus/Minus
Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197
||||||||||| || | |||| | | | ||||| || || | |||||||| | | |
Sbjct 117335 TCGAACTCGTCGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAGTC 117276
Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257
||||| |||| | || || || ||||| || || || |||||||| || || | ||
Sbjct 117275 CACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGAAG 117216
Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317
||||| | || | ||||| || || ||||| || ||||||||| | |
Sbjct 117215 AGATCACGGGCACGGATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAG 117156
Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377
| ||| | ||||| || || | ||| ||||| | | | ||||| | ||||| || |||
Sbjct 117155 ACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCCGCCC 117096
Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437
|| || | |||||| || ||||| || | || | || ||| |||| ||| ||||| ||
Sbjct 117095 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGTTGGAG 117036
Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63497
|||| ||||| |||| || ||| || | ||||| || || |||||
Sbjct 117035 GTACCGTTGGTGCCGGCAATGTAGGAGCCGGTAGCACGGATGCGGTGGATGTTCAGACCA 116976
Query 63498 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCT 63557
|| || || ||||| || ||||| | || || || | ||||||||||| || ||
Sbjct 116975 ATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATGCCGTCA 116916
Query 63558 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGT 63613
||||||||||| |||||| | || || ||| ||| | ||| | || |||
Sbjct 116915 ATGCTATCATCCTTCATGTCGACAAGGAAGCAG---GACGAAAGCTGA-GCCTGGGGAGT 116860
Query 63614 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63673
|| || || || | ||| ||||| || || || || | || || | || |||||
Sbjct 116859 ACCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAAGTACTTGCTTGACATGAGGTTGTA 116800
Query 63674 CGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTA 63729
|||||||| | || || || || | |||| || || | |||||||| |
Sbjct 116799 AGTCTCAATGACACGCTCAATGTCGTCGCCGTGGATG----CCGACAGACACACGCATGA 116744
Query 63730 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63789
||||||||| || | || ||||||||| ||| | || | || ||| || || |
Sbjct 116743 TCATGTGCTGGGGACGCTCGACGATCTTGCCGTTGAGCTTGAGCAGGTATGAGCGCTCGA 116684
Query 63790 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 63849
|| || || ||||| || | ||| ||||| || ||||| | ||| |||||| ||
Sbjct 116683 GGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTACACAATGGCCGAGTCGA 116624
Query 63850 GTTTATCCTT 63859
| | |||||
Sbjct 116623 GCTCGTCCTT 116614
>seq3
Length=3980562
Score = 102 bits (112), Expect = 1e-16
Identities = 140/195 (72%), Gaps = 3/195 (2%)
Strand=Plus/Minus
Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377
||| || |||||||| | || || |||||||| || ||||| |||||||| |||||
Sbjct 2739217 GTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCC 2739158
Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437
||||| || ||||| || ||||| ||||| | || |||||||| || || || ||
Sbjct 2739157 GCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGACCGC 2739098
Query 33438 AGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTGAGC 33494
|||||||||||| || | || | | | | | ||| |||||||| ||||
Sbjct 2739097 AGCAAAGGCAATGAGGCGCTGAGCGAAGGTAGACTCCCGGTCGGAGATCCACTTCAGAGC 2739038
Query 33495 CCAATCGGCCTTCTT 33509
||| |||||||||||
Sbjct 2739037 CCAGTCGGCCTTCTT 2739023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622945852876680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |