Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq22 187 3e-42 seq3 102 1e-16 >seq22 Length=534521 Score = 187 bits (206), Expect = 3e-42 Identities = 481/730 (66%), Gaps = 16/730 (2%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 ||||||||||| || | |||| | | | ||||| || || | |||||||| | | | Sbjct 117335 TCGAACTCGTCGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAGTC 117276 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 ||||| |||| | || || || ||||| || || || |||||||| || || | || Sbjct 117275 CACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGAAG 117216 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 ||||| | || | ||||| || || ||||| || ||||||||| | | Sbjct 117215 AGATCACGGGCACGGATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAG 117156 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | ||| | ||||| || || | ||| ||||| | | | ||||| | ||||| || ||| Sbjct 117155 ACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCCGCCC 117096 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || || | |||||| || ||||| || | || | || ||| |||| ||| ||||| || Sbjct 117095 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGTTGGAG 117036 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63497 |||| ||||| |||| || ||| || | ||||| || || ||||| Sbjct 117035 GTACCGTTGGTGCCGGCAATGTAGGAGCCGGTAGCACGGATGCGGTGGATGTTCAGACCA 116976 Query 63498 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCT 63557 || || || ||||| || ||||| | || || || | ||||||||||| || || Sbjct 116975 ATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATGCCGTCA 116916 Query 63558 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGT 63613 ||||||||||| |||||| | || || ||| ||| | ||| | || ||| Sbjct 116915 ATGCTATCATCCTTCATGTCGACAAGGAAGCAG---GACGAAAGCTGA-GCCTGGGGAGT 116860 Query 63614 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63673 || || || || | ||| ||||| || || || || | || || | || ||||| Sbjct 116859 ACCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAAGTACTTGCTTGACATGAGGTTGTA 116800 Query 63674 CGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTA 63729 |||||||| | || || || || | |||| || || | |||||||| | Sbjct 116799 AGTCTCAATGACACGCTCAATGTCGTCGCCGTGGATG----CCGACAGACACACGCATGA 116744 Query 63730 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63789 ||||||||| || | || ||||||||| ||| | || | || ||| || || | Sbjct 116743 TCATGTGCTGGGGACGCTCGACGATCTTGCCGTTGAGCTTGAGCAGGTATGAGCGCTCGA 116684 Query 63790 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 63849 || || || ||||| || | ||| ||||| || ||||| | ||| |||||| || Sbjct 116683 GGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTACACAATGGCCGAGTCGA 116624 Query 63850 GTTTATCCTT 63859 | | ||||| Sbjct 116623 GCTCGTCCTT 116614 >seq3 Length=3980562 Score = 102 bits (112), Expect = 1e-16 Identities = 140/195 (72%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||| || |||||||| | || || |||||||| || ||||| |||||||| ||||| Sbjct 2739217 GTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCC 2739158 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||||| || ||||| || ||||| ||||| | || |||||||| || || || || Sbjct 2739157 GCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGACCGC 2739098 Query 33438 AGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTGAGC 33494 |||||||||||| || | || | | | | | ||| |||||||| |||| Sbjct 2739097 AGCAAAGGCAATGAGGCGCTGAGCGAAGGTAGACTCCCGGTCGGAGATCCACTTCAGAGC 2739038 Query 33495 CCAATCGGCCTTCTT 33509 ||| ||||||||||| Sbjct 2739037 CCAGTCGGCCTTCTT 2739023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945852876680