Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 >seq3 Length=3980562 Score = 104 bits (114), Expect = 2e-17 Identities = 221/328 (67%), Gaps = 4/328 (1%) Strand=Plus/Plus Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221 |||| ||| | ||||| ||| |||| | ||||| |||||||||||||| ||| | Sbjct 2117589 ATGGCTACCGTCAACGTTCGTCGCGATGTCACCGACGCCTTCTACCGCTACAAGATG--G 2117646 Query 6222 CGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACA 6279 | | |||| ||||| | || || || || ||||| || || |||||| | |||||| Sbjct 2117647 AGAAGCTGCAGACCAAGATTGAAGGCAAAGGTAACGGCATCAAGACCGTCGTCGTCAACT 2117706 Query 6280 TGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGT 6339 || ||||| || | | | |||||| | |||| | || || ||||| | Sbjct 2117707 TGAGCAGCGTCGCCCAGTCTTTGGCCCGCCCTCCTGCCTATGTCATCAAGTACTTCGGTT 2117766 Query 6340 GCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGAT 6399 ||| ||||| |||||||| | | |||| | |||| || | ||| | ||||| Sbjct 2117767 TCGAGCTTGGGGCTCAGACCAACATCGATCCCGCTGACGACCGTTGGATCATCAACGGCG 2117826 Query 6400 CGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGT 6459 | ||| || | | ||||| ||||||| || || ||||| || |||||| || || | Sbjct 2117827 CTCATGACGCAACTAAGCTTCAGGACTACCTCGATGGCTTCATCAACAAGTTCGTTCTCT 2117886 Query 6460 GTCGGGAATGCGATAACCCGGAGACCGA 6487 | | | ||| | ||||| |||||||| Sbjct 2117887 GCAGAAAGTGCAAGAACCCTGAGACCGA 2117914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946493784763