Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq22 190 3e-43 seq3 84.2 3e-11 >seq22 Length=534521 Score = 190 bits (210), Expect = 3e-43 Identities = 482/730 (66%), Gaps = 16/730 (2%) Strand=Plus/Minus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 ||||||||||| || | |||| | | || ||||| || || | |||||||| | | | Sbjct 117335 TCGAACTCGTCGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAGTC 117276 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 ||||| |||| | || || || ||||| || || || |||||||| || || | || Sbjct 117275 CACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGAAG 117216 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 ||||| | || | ||||| || || ||||| || ||||||||| | | Sbjct 117215 AGATCACGGGCACGGATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAG 117156 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 | ||| | ||||| || || | ||| ||||| | | | ||||| | ||||| || ||| Sbjct 117155 ACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCCGCCC 117096 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 || || | |||||| || ||||| || | || | || ||| |||| ||| || ||||| Sbjct 117095 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGTTGGAG 117036 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63352 ||||| ||||| || | || ||| || | ||||| || || ||||| Sbjct 117035 GTACCGTTGGTGCCGGCAATGTAGGAGCCGGTAGCACGGATGCGGTGGATGTTCAGACCA 116976 Query 63353 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 63412 || || || ||||| || ||||| | || || || | || ||||||||||| || Sbjct 116975 ATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATGCCGTCA 116916 Query 63413 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGT 63468 || ||||||||| |||||| | || || ||| ||| | ||| | || ||| Sbjct 116915 ATGCTATCATCCTTCATGTCGACAAGGAAGCAG---GACGAAAGCTGA-GCCTGGGGAGT 116860 Query 63469 TCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTA 63528 || || || || | ||| ||||| || || || || | || || | || ||||| Sbjct 116859 ACCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAAGTACTTGCTTGACATGAGGTTGTA 116800 Query 63529 CGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTA 63584 |||||||| | || || || || | |||| || || | |||||||| | Sbjct 116799 AGTCTCAATGACACGCTCAATGTCGTCGCCGTGGATG----CCGACAGACACACGCATGA 116744 Query 63585 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63644 ||||||||| || | || ||||||||| ||| | || | || ||| || || | Sbjct 116743 TCATGTGCTGGGGACGCTCGACGATCTTGCCGTTGAGCTTGAGCAGGTATGAGCGCTCGA 116684 Query 63645 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 63704 || || || ||||| || | ||| ||||| || ||||| | ||| |||||| || Sbjct 116683 GGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTACACAATGGCCGAGTCGA 116624 Query 63705 GTTTATCCTT 63714 | | ||||| Sbjct 116623 GCTCGTCCTT 116614 >seq3 Length=3980562 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/195 (70%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 32675 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 32734 ||| || |||||||| | || | |||||||| || ||||| |||||||| ||||| Sbjct 2739217 GTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCC 2739158 Query 32735 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 32794 ||||| || ||||| || ||||| || || | || ||||| || || || || || Sbjct 2739157 GCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGACCGC 2739098 Query 32795 CGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTGAGC 32851 ||||||||||| || | || | | | | | ||| |||||||| |||| Sbjct 2739097 AGCAAAGGCAATGAGGCGCTGAGCGAAGGTAGACTCCCGGTCGGAGATCCACTTCAGAGC 2739038 Query 32852 CCAATCGGCCTTCTT 32866 ||| ||||||||||| Sbjct 2739037 CCAGTCGGCCTTCTT 2739023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630629770800