Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq22 190 3e-43
seq3 84.2 3e-11
>seq22
Length=534521
Score = 190 bits (210), Expect = 3e-43
Identities = 482/730 (66%), Gaps = 16/730 (2%)
Strand=Plus/Minus
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
||||||||||| || | |||| | | || ||||| || || | |||||||| | | |
Sbjct 117335 TCGAACTCGTCGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAGTC 117276
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112
||||| |||| | || || || ||||| || || || |||||||| || || | ||
Sbjct 117275 CACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGAAG 117216
Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172
||||| | || | ||||| || || ||||| || ||||||||| | |
Sbjct 117215 AGATCACGGGCACGGATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAG 117156
Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232
| ||| | ||||| || || | ||| ||||| | | | ||||| | ||||| || |||
Sbjct 117155 ACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCCGCCC 117096
Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292
|| || | |||||| || ||||| || | || | || ||| |||| ||| || |||||
Sbjct 117095 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGTTGGAG 117036
Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63352
||||| ||||| || | || ||| || | ||||| || || |||||
Sbjct 117035 GTACCGTTGGTGCCGGCAATGTAGGAGCCGGTAGCACGGATGCGGTGGATGTTCAGACCA 116976
Query 63353 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 63412
|| || || ||||| || ||||| | || || || | || ||||||||||| ||
Sbjct 116975 ATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATGCCGTCA 116916
Query 63413 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGT 63468
|| ||||||||| |||||| | || || ||| ||| | ||| | || |||
Sbjct 116915 ATGCTATCATCCTTCATGTCGACAAGGAAGCAG---GACGAAAGCTGA-GCCTGGGGAGT 116860
Query 63469 TCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTA 63528
|| || || || | ||| ||||| || || || || | || || | || |||||
Sbjct 116859 ACCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAAGTACTTGCTTGACATGAGGTTGTA 116800
Query 63529 CGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTA 63584
|||||||| | || || || || | |||| || || | |||||||| |
Sbjct 116799 AGTCTCAATGACACGCTCAATGTCGTCGCCGTGGATG----CCGACAGACACACGCATGA 116744
Query 63585 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63644
||||||||| || | || ||||||||| ||| | || | || ||| || || |
Sbjct 116743 TCATGTGCTGGGGACGCTCGACGATCTTGCCGTTGAGCTTGAGCAGGTATGAGCGCTCGA 116684
Query 63645 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 63704
|| || || ||||| || | ||| ||||| || ||||| | ||| |||||| ||
Sbjct 116683 GGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTACACAATGGCCGAGTCGA 116624
Query 63705 GTTTATCCTT 63714
| | |||||
Sbjct 116623 GCTCGTCCTT 116614
>seq3
Length=3980562
Score = 84.2 bits (92), Expect = 3e-11
Identities = 136/195 (70%), Gaps = 3/195 (2%)
Strand=Plus/Minus
Query 32675 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 32734
||| || |||||||| | || | |||||||| || ||||| |||||||| |||||
Sbjct 2739217 GTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCC 2739158
Query 32735 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 32794
||||| || ||||| || ||||| || || | || ||||| || || || || ||
Sbjct 2739157 GCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGACCGC 2739098
Query 32795 CGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTGAGC 32851
||||||||||| || | || | | | | | ||| |||||||| ||||
Sbjct 2739097 AGCAAAGGCAATGAGGCGCTGAGCGAAGGTAGACTCCCGGTCGGAGATCCACTTCAGAGC 2739038
Query 32852 CCAATCGGCCTTCTT 32866
||| |||||||||||
Sbjct 2739037 CCAGTCGGCCTTCTT 2739023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633630629770800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |