Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq22 123 5e-23
seq3 116 8e-21
seq2 113 9e-20
seq25 87.8 4e-12
seq20 87.8 4e-12
seq8 87.8 4e-12
seq11 86.0 1e-11
>seq22
Length=534521
Score = 123 bits (136), Expect = 5e-23
Identities = 418/644 (65%), Gaps = 13/644 (2%)
Strand=Plus/Minus
Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174
||| | |||||| | ||| ||||| || || ||||| | | | |||||| || |||
Sbjct 118353 CTGGGACTGATCAATAAAAGCACCGCGGTCGGCAGCCATTTGCACGACTGTCCTCTGAGA 118294
Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTG 293234
||||||||| |||||||| | ||||||||||| | | ||| | |||||
Sbjct 118293 GATCTCCCAGACGGTCTTGTAGAGAGCCTTGACATCGGCGGGGATGTTGGGGATGTTCTG 118234
Query 293235 GATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCCCA---C 293290
| ||| || || | |||||| || |||||||||| | || ||||| || |||| |
Sbjct 118233 AACAGAACCGCCCTCGGCAATGATGCGGTTCTTCATGCTGTCAGACCAGAGACCCATGTC 118174
Query 293291 GAGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGC 293350
|| ||| | || | || || ||| |||||| || |||| ||||| ||||| |
Sbjct 118173 GA-CAAGGTCCTTGAGG---AGCCAAGGGTTGACGACCTGGAAGTCACCTGCGAGCACAC 118118
Query 293351 GACGGCTGTAAATGTTCGAAGTGATGGGTTCGGCTGCCTCAACAGACCCGCAAATCTGAG 293410
|||| ||| ||||| || ||| || || ||| ||| |||||| |
Sbjct 118117 GACGCGAGTAGATGTTTGAGGTGTAAGGCTCAAAGCACTCGTTGTTGCCGAGAATCTGGG 118058
Query 293411 CAGTAGATGCGGTAGGCATAAGAGCAGTCGTCAGAGAGTTCCTCACACC---CTTCTTGA 293467
||| || |||||||| | || | || | ||| | ||||| || |||||
Sbjct 118057 AGGTACTGGCAGTAGGCATGGGGGCGACCAGCAAACTGTTGCGGACACCATGCTCCTTGA 117998
Query 293468 CACGCGATTCGAGACCCGCCCAGT-CCAGAGCAGTCTGAGGTGTAACACCCCAGAGATGA 293526
|| | ||| | ||||||| |||||| | | || || ||| ||| | |
Sbjct 117997 TCTGCTCCTTGAGGCTGGCCCAGTCCCAGAG-ATCCGTGGGGGTGACATTCCACATGTCG 117939
Query 293527 TACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCA 293586
||||| | |||||||| | ||||||| ||||| | |||| | |||||||||||
Sbjct 117938 TACTGGAGGATACCCTGCGAGACAGGAGAGCCCTCGTAAGTGGAGTAAGGGCCATGCTCC 117879
Query 293587 TCAGAGAGCTCGCAAGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACGG 293646
| | | ||| ||| || || ||||| ||| ||| ||||||||||| |
Sbjct 117878 TTGGCGCACTCCATAGAGGCAGTAAGCGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTG 117819
Query 293647 TTGAGCTTGCGAGCCTGCTCAGAGTCAAACGGCATCTTCAGCTGGAAGAACACATCCTGC 293706
||||||| | ||||| ||| || || ||||| ||| | ||| ||||
Sbjct 117818 TTGAGCTGTCTAGCCTCGGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAGGCATCGGCG 117759
Query 293707 AGACCCTGTACACCTACACCAACGGGGCGACGACGCTTGTTGCT 293750
|||||||| ||||| | ||| | |||||| | ||| |||||||
Sbjct 117758 AGACCCTGAACACCGAGACCGATGGGGCGGTGGCGCATGTTGCT 117715
>seq3
Length=3980562
Score = 116 bits (128), Expect = 8e-21
Identities = 435/673 (65%), Gaps = 13/673 (2%)
Strand=Plus/Plus
Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755
|| || ||||| || || ||||||||||||||||| || | | || ||||| || | |
Sbjct 736919 GTTGGGTCTCTTTCTGGCGGTTGGAAGATGAAGCTTGCGTTGGCGCGTGCCATGCTGCAG 736978
Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815
||||||||||| || || || || || || ||||| ||| ||||| ||||| | |||
Sbjct 736979 CGTGCCGATGTTCTCCTCCTCGACGAACCTACCAATCACTTGGACGTTGCCAACATCGCC 737038
Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGAC 279875
||||| | | ||||| | | | | | | | || || || ||||||||
Sbjct 737039 TGGCTTGAGGAGTACCTCAAGACACACACAGACATCACCAGTCTGATCGTTTCTCACGAT 737098
Query 279876 TCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTC 279935
||||||||||| || ||| ||| |||| ||||| |||| |||||||
Sbjct 737099 TCTGGCTTCCTCGACAACGTCACAACTGACATCTACCACTACGAGCCTGGCAAGAAGCTC 737158
Query 279936 TCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAG--CGCCCTGAGGCGGCCGCCT 279993
| || ||||| ||| ||| ||||| | ||| ||||| ||||| | |
Sbjct 737159 GGACACTTCAAGGGCAATCTGAATGCCTTCGT--CCAAGTCCGCCCCGAGGCCAAGTCGT 737216
Query 279994 ACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGG 280053
|||| ||| | | ||| || ||| | |||||| || || ||||| |
Sbjct 737217 ACTACACGCTGTCTGCCTCCAACGTGCAGTTCAAGTTCCCTCCCCCGGGTATTCTGTCTG 737276
Query 280054 GCATCACATCAAAGGATCGCGCAATCAT--GAAGCTCCGTGGCGTCTCCTTTGCTTATCC 280111
| ||| || || || || ||||| | | || |||||| | || ||
Sbjct 737277 GAGTCAAGTCCAACACCCGTGCCATCATCCGCATGACC--AACGTCTCGTACCAGTACCC 737334
Query 280112 CAATGGCCCCAA--CAT-CTTCAGCAGTGTCAACTCGCAGGTTTCTATGAACTCACGGAT 280168
|| | |||||| | | | | ||| ||||| || ||| | | | ||| || |
Sbjct 737335 GAAGGCCCCCAAGCCGTCCCTTAGCGATGTCACCTGCCAGCTCACGCTCTCCTCGCGAGT 737394
Query 280169 TGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGA 280228
|| || |||||||| || ||||| || ||||| || || ||||| | || || |||||
Sbjct 737395 TGCCGTGATTGGACCTAACGGTGCAGGCAAGTCGACGCTCATCAAGATTCTCACGGGCGA 737454
Query 280229 GACCCAGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCG 280287
| | |||| || || | ||| |||||| |||||| |||| || | ||| ||
Sbjct 737455 GGTCATCCCCAC-GACTGGAAAGGTTGAGAAGCACCCCAACCTGCGTATCGGATACATCA 737513
Query 280288 CTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTC 280347
||||| ||| || | ||| | |||| || ||||| | ||| || ||||| ||| | |
Sbjct 737514 AGCAGCATGCTCTCGAGCACGTTGAGATGCATCTGGAGAAGACCCCCAACCAGTACCTCC 737573
Query 280348 AGTGGCGCTATGC 280360
||||||| |||||
Sbjct 737574 AGTGGCGTTATGC 737586
Score = 107 bits (118), Expect = 4e-18
Identities = 285/430 (66%), Gaps = 4/430 (1%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||| ||||| |||||||||||| |||||||| |||
Sbjct 2739498 TCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTG 2739439
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
||| ||| ||| | ||| || || |||| || |||||| || || ||||| |
Sbjct 2739438 GCACGGTAGACCTTCTCGTTGCCGAGAGCGACGAGGAGGCGGTCGGCGACGAACTCGATG 2739379
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| ||| || | ||||||||||||| || || || | ||||| | |
Sbjct 2739378 TACTGCTTCATGAGGTTCGAGTTCATGCCAAGCAGGGCGCAGGGCAGAGCCTCGGTAAGG 2739319
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTG-TGCCAGAGACAG 251801
|| |||| |||| | || || || | || ||| || | | | | |
Sbjct 2739318 AACTCCTGTTCGATCTTGACAGCATCGATGATGATCTCCTCGACGAGCTTCTTGCTGGGG 2739259
Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861
| ||||| || | ||| ||||||| | |||| | ||| || |||||||| ||
Sbjct 2739258 C-GGTTCTTGAGGTGGGAGAACAGGAGGCAGGCAAAGTCAGTGTGGAGGCCCTCGTCACG 2739200
Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921
||||| ||||||||| | ||||| ||||| | || || ||| ||||||||||
Sbjct 2739199 CGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAA 2739140
Query 251922 GATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACA-CCCATGCAACAAGGC 251980
||| | | |||| || ||| | | ||||||||| | || | | |||| ||||
Sbjct 2739139 GATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGAC-CGCAGCAAAGGCAATGAGGC 2739081
Query 251981 GCTCAGCAAA 251990
||| ||| ||
Sbjct 2739080 GCTGAGCGAA 2739071
>seq2
Length=4043926
Score = 113 bits (124), Expect = 9e-20
Identities = 142/195 (73%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219
||| || |||| |||||||| ||||||||||| || ||||||||||| ||||| |||||
Sbjct 632982 CTCGCGTATTGCCGTCATTGGCCCCAATGGTGCTGGCAAGTCTACCCTGATCAACGTCCT 632923
Query 280220 GACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279
||||| ||| | |||| |||| | | |||| ||||| || || ||
Sbjct 632922 CACTGGTGAGCTCATCCCCACCCAGGGTGAGATCTACCAGCACGAGAACATCCGTATCGC 632863
Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339
||| || |||||||||||| ||| ||||| |||||| |||||| ||| ||| |
Sbjct 632862 CTACATCAAGCAGCACGCTTTCGCCCATATCGACAACCACTTGGACAAGACCCCTTCGGA 632803
Query 280340 ATACATTCAGTGGCG 280354
||||| ||||||||
Sbjct 632802 GTACATCCAGTGGCG 632788
Score = 96.9 bits (106), Expect = 7e-15
Identities = 119/160 (74%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 280680 GGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAG 280739
||||| || ||||| || ||||||||||||| || ||||| || || ||||||
Sbjct 632417 GGTCTCGATGCCGAGCTTGTCTCTCACTCTCGCATGCGTGGTCTGTCCGGTGGCCAGCGT 632358
Query 280740 GTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGA 280798
||||| | ||| | || |||| |||||| | ||||||| ||||||||||||||||
Sbjct 632357 GTCAAGGTCGTCCTGTCCGCTTGCTC-GTGGCAGCGCCCTCACTTGATCGTTCTCGACGA 632299
Query 280799 GCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838
||||||||||| || ||| | || ||||| || |||
Sbjct 632298 ACCTACCAACTACCTCGACAGAGACTCTCTGGGTGCCCTG 632259
Score = 93.3 bits (102), Expect = 9e-14
Identities = 156/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| |||||||| || |||| |||||| ||||| || |||| ||||||||||| |||
Sbjct 633797 GGCGAGGATCTCTGCAACTGCACTTTCTCTCTCGCTTACGGTGCCAAGATTCTGCTCAAC 633738
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
||| || | ||||||| || ||| || ||||| ||| ||||| ||| |
Sbjct 633737 CAGACCAGCTTGCGTCTCAAGCGCGGTCGCCGTTACGGTCTTTGCGGACCCAACGGATCC 633678
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| || || ||||||||||| |||| ||| | || || ||||| || |||
Sbjct 633677 GGCAAGTCTACCCTGATGCGCGCCATCAACAACGAGCAGGTCGAGGGCTTTCCCAA-GCA 633619
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566
|| || | ||| || | || ||||||||| ||||||||
Sbjct 633618 GAACGAAGTCAAGACTGTCTTCGTCGAGCACGACCTCGACTCC 633576
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct 173897 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 173838
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 173837 CCCGCATCGGGC 173826
>seq25
Length=380168
Score = 87.8 bits (96), Expect = 4e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||||||||||| ||||||||||| ||||||||||||| ||| | ||||||||
Sbjct 340025 AGCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGAC 339966
Query 142563 CCCCACATCGGGC 142575
|||| ||||||||
Sbjct 339965 CCCCGCATCGGGC 339953
>seq20
Length=575516
Score = 87.8 bits (96), Expect = 4e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||||||||||| ||||||||||| ||||||||||||| ||| | ||||||||
Sbjct 427882 AGCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGAC 427941
Query 142563 CCCCACATCGGGC 142575
|||| ||||||||
Sbjct 427942 CCCCGCATCGGGC 427954
>seq8
Length=1257856
Score = 87.8 bits (96), Expect = 4e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||||||||||| ||||||||||| ||||||||||||| ||| | ||||||||
Sbjct 1252282 AGCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGAC 1252341
Query 142563 CCCCACATCGGGC 142575
|||| ||||||||
Sbjct 1252342 CCCCGCATCGGGC 1252354
>seq11
Length=979700
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct 114741 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 114800
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 114801 CCCGCATCGGGC 114812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834521735493
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