Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq22 123 5e-23 seq3 116 8e-21 seq2 113 9e-20 seq25 87.8 4e-12 seq20 87.8 4e-12 seq8 87.8 4e-12 seq11 86.0 1e-11 >seq22 Length=534521 Score = 123 bits (136), Expect = 5e-23 Identities = 418/644 (65%), Gaps = 13/644 (2%) Strand=Plus/Minus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174 ||| | |||||| | ||| ||||| || || ||||| | | | |||||| || ||| Sbjct 118353 CTGGGACTGATCAATAAAAGCACCGCGGTCGGCAGCCATTTGCACGACTGTCCTCTGAGA 118294 Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTG 293234 ||||||||| |||||||| | ||||||||||| | | ||| | ||||| Sbjct 118293 GATCTCCCAGACGGTCTTGTAGAGAGCCTTGACATCGGCGGGGATGTTGGGGATGTTCTG 118234 Query 293235 GATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCCCA---C 293290 | ||| || || | |||||| || |||||||||| | || ||||| || |||| | Sbjct 118233 AACAGAACCGCCCTCGGCAATGATGCGGTTCTTCATGCTGTCAGACCAGAGACCCATGTC 118174 Query 293291 GAGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGC 293350 || ||| | || | || || ||| |||||| || |||| ||||| ||||| | Sbjct 118173 GA-CAAGGTCCTTGAGG---AGCCAAGGGTTGACGACCTGGAAGTCACCTGCGAGCACAC 118118 Query 293351 GACGGCTGTAAATGTTCGAAGTGATGGGTTCGGCTGCCTCAACAGACCCGCAAATCTGAG 293410 |||| ||| ||||| || ||| || || ||| ||| |||||| | Sbjct 118117 GACGCGAGTAGATGTTTGAGGTGTAAGGCTCAAAGCACTCGTTGTTGCCGAGAATCTGGG 118058 Query 293411 CAGTAGATGCGGTAGGCATAAGAGCAGTCGTCAGAGAGTTCCTCACACC---CTTCTTGA 293467 ||| || |||||||| | || | || | ||| | ||||| || ||||| Sbjct 118057 AGGTACTGGCAGTAGGCATGGGGGCGACCAGCAAACTGTTGCGGACACCATGCTCCTTGA 117998 Query 293468 CACGCGATTCGAGACCCGCCCAGT-CCAGAGCAGTCTGAGGTGTAACACCCCAGAGATGA 293526 || | ||| | ||||||| |||||| | | || || ||| ||| | | Sbjct 117997 TCTGCTCCTTGAGGCTGGCCCAGTCCCAGAG-ATCCGTGGGGGTGACATTCCACATGTCG 117939 Query 293527 TACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCA 293586 ||||| | |||||||| | ||||||| ||||| | |||| | ||||||||||| Sbjct 117938 TACTGGAGGATACCCTGCGAGACAGGAGAGCCCTCGTAAGTGGAGTAAGGGCCATGCTCC 117879 Query 293587 TCAGAGAGCTCGCAAGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACGG 293646 | | | ||| ||| || || ||||| ||| ||| ||||||||||| | Sbjct 117878 TTGGCGCACTCCATAGAGGCAGTAAGCGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTG 117819 Query 293647 TTGAGCTTGCGAGCCTGCTCAGAGTCAAACGGCATCTTCAGCTGGAAGAACACATCCTGC 293706 ||||||| | ||||| ||| || || ||||| ||| | ||| |||| Sbjct 117818 TTGAGCTGTCTAGCCTCGGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAGGCATCGGCG 117759 Query 293707 AGACCCTGTACACCTACACCAACGGGGCGACGACGCTTGTTGCT 293750 |||||||| ||||| | ||| | |||||| | ||| ||||||| Sbjct 117758 AGACCCTGAACACCGAGACCGATGGGGCGGTGGCGCATGTTGCT 117715 >seq3 Length=3980562 Score = 116 bits (128), Expect = 8e-21 Identities = 435/673 (65%), Gaps = 13/673 (2%) Strand=Plus/Plus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || ||||| || || ||||||||||||||||| || | | || ||||| || | | Sbjct 736919 GTTGGGTCTCTTTCTGGCGGTTGGAAGATGAAGCTTGCGTTGGCGCGTGCCATGCTGCAG 736978 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 ||||||||||| || || || || || || ||||| ||| ||||| ||||| | ||| Sbjct 736979 CGTGCCGATGTTCTCCTCCTCGACGAACCTACCAATCACTTGGACGTTGCCAACATCGCC 737038 Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGAC 279875 ||||| | | ||||| | | | | | | | || || || |||||||| Sbjct 737039 TGGCTTGAGGAGTACCTCAAGACACACACAGACATCACCAGTCTGATCGTTTCTCACGAT 737098 Query 279876 TCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTC 279935 ||||||||||| || ||| ||| |||| ||||| |||| ||||||| Sbjct 737099 TCTGGCTTCCTCGACAACGTCACAACTGACATCTACCACTACGAGCCTGGCAAGAAGCTC 737158 Query 279936 TCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAG--CGCCCTGAGGCGGCCGCCT 279993 | || ||||| ||| ||| ||||| | ||| ||||| ||||| | | Sbjct 737159 GGACACTTCAAGGGCAATCTGAATGCCTTCGT--CCAAGTCCGCCCCGAGGCCAAGTCGT 737216 Query 279994 ACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGG 280053 |||| ||| | | ||| || ||| | |||||| || || ||||| | Sbjct 737217 ACTACACGCTGTCTGCCTCCAACGTGCAGTTCAAGTTCCCTCCCCCGGGTATTCTGTCTG 737276 Query 280054 GCATCACATCAAAGGATCGCGCAATCAT--GAAGCTCCGTGGCGTCTCCTTTGCTTATCC 280111 | ||| || || || || ||||| | | || |||||| | || || Sbjct 737277 GAGTCAAGTCCAACACCCGTGCCATCATCCGCATGACC--AACGTCTCGTACCAGTACCC 737334 Query 280112 CAATGGCCCCAA--CAT-CTTCAGCAGTGTCAACTCGCAGGTTTCTATGAACTCACGGAT 280168 || | |||||| | | | | ||| ||||| || ||| | | | ||| || | Sbjct 737335 GAAGGCCCCCAAGCCGTCCCTTAGCGATGTCACCTGCCAGCTCACGCTCTCCTCGCGAGT 737394 Query 280169 TGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGA 280228 || || |||||||| || ||||| || ||||| || || ||||| | || || ||||| Sbjct 737395 TGCCGTGATTGGACCTAACGGTGCAGGCAAGTCGACGCTCATCAAGATTCTCACGGGCGA 737454 Query 280229 GACCCAGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCG 280287 | | |||| || || | ||| |||||| |||||| |||| || | ||| || Sbjct 737455 GGTCATCCCCAC-GACTGGAAAGGTTGAGAAGCACCCCAACCTGCGTATCGGATACATCA 737513 Query 280288 CTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTC 280347 ||||| ||| || | ||| | |||| || ||||| | ||| || ||||| ||| | | Sbjct 737514 AGCAGCATGCTCTCGAGCACGTTGAGATGCATCTGGAGAAGACCCCCAACCAGTACCTCC 737573 Query 280348 AGTGGCGCTATGC 280360 ||||||| ||||| Sbjct 737574 AGTGGCGTTATGC 737586 Score = 107 bits (118), Expect = 4e-18 Identities = 285/430 (66%), Gaps = 4/430 (1%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| |||||||||||| |||||||| ||| Sbjct 2739498 TCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTG 2739439 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 ||| ||| ||| | ||| || || |||| || |||||| || || ||||| | Sbjct 2739438 GCACGGTAGACCTTCTCGTTGCCGAGAGCGACGAGGAGGCGGTCGGCGACGAACTCGATG 2739379 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||| || | ||||||||||||| || || || | ||||| | | Sbjct 2739378 TACTGCTTCATGAGGTTCGAGTTCATGCCAAGCAGGGCGCAGGGCAGAGCCTCGGTAAGG 2739319 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTG-TGCCAGAGACAG 251801 || |||| |||| | || || || | || ||| || | | | | | Sbjct 2739318 AACTCCTGTTCGATCTTGACAGCATCGATGATGATCTCCTCGACGAGCTTCTTGCTGGGG 2739259 Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861 | ||||| || | ||| ||||||| | |||| | ||| || |||||||| || Sbjct 2739258 C-GGTTCTTGAGGTGGGAGAACAGGAGGCAGGCAAAGTCAGTGTGGAGGCCCTCGTCACG 2739200 Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921 ||||| ||||||||| | ||||| ||||| | || || ||| |||||||||| Sbjct 2739199 CGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAA 2739140 Query 251922 GATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACA-CCCATGCAACAAGGC 251980 ||| | | |||| || ||| | | ||||||||| | || | | |||| |||| Sbjct 2739139 GATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGAC-CGCAGCAAAGGCAATGAGGC 2739081 Query 251981 GCTCAGCAAA 251990 ||| ||| || Sbjct 2739080 GCTGAGCGAA 2739071 >seq2 Length=4043926 Score = 113 bits (124), Expect = 9e-20 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || |||| |||||||| ||||||||||| || ||||||||||| ||||| ||||| Sbjct 632982 CTCGCGTATTGCCGTCATTGGCCCCAATGGTGCTGGCAAGTCTACCCTGATCAACGTCCT 632923 Query 280220 GACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279 ||||| ||| | |||| |||| | | |||| ||||| || || || Sbjct 632922 CACTGGTGAGCTCATCCCCACCCAGGGTGAGATCTACCAGCACGAGAACATCCGTATCGC 632863 Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339 ||| || |||||||||||| ||| ||||| |||||| |||||| ||| ||| | Sbjct 632862 CTACATCAAGCAGCACGCTTTCGCCCATATCGACAACCACTTGGACAAGACCCCTTCGGA 632803 Query 280340 ATACATTCAGTGGCG 280354 ||||| |||||||| Sbjct 632802 GTACATCCAGTGGCG 632788 Score = 96.9 bits (106), Expect = 7e-15 Identities = 119/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 280680 GGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAG 280739 ||||| || ||||| || ||||||||||||| || ||||| || || |||||| Sbjct 632417 GGTCTCGATGCCGAGCTTGTCTCTCACTCTCGCATGCGTGGTCTGTCCGGTGGCCAGCGT 632358 Query 280740 GTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGA 280798 ||||| | ||| | || |||| |||||| | ||||||| |||||||||||||||| Sbjct 632357 GTCAAGGTCGTCCTGTCCGCTTGCTC-GTGGCAGCGCCCTCACTTGATCGTTCTCGACGA 632299 Query 280799 GCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838 ||||||||||| || ||| | || ||||| || ||| Sbjct 632298 ACCTACCAACTACCTCGACAGAGACTCTCTGGGTGCCCTG 632259 Score = 93.3 bits (102), Expect = 9e-14 Identities = 156/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || |||||||| || |||| |||||| ||||| || |||| ||||||||||| ||| Sbjct 633797 GGCGAGGATCTCTGCAACTGCACTTTCTCTCTCGCTTACGGTGCCAAGATTCTGCTCAAC 633738 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 ||| || | ||||||| || ||| || ||||| ||| ||||| ||| | Sbjct 633737 CAGACCAGCTTGCGTCTCAAGCGCGGTCGCCGTTACGGTCTTTGCGGACCCAACGGATCC 633678 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| || || ||||||||||| |||| ||| | || || ||||| || ||| Sbjct 633677 GGCAAGTCTACCCTGATGCGCGCCATCAACAACGAGCAGGTCGAGGGCTTTCCCAA-GCA 633619 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566 || || | ||| || | || ||||||||| |||||||| Sbjct 633618 GAACGAAGTCAAGACTGTCTTCGTCGAGCACGACCTCGACTCC 633576 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 173897 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 173838 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 173837 CCCGCATCGGGC 173826 >seq25 Length=380168 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| Sbjct 340025 AGCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGAC 339966 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 339965 CCCCGCATCGGGC 339953 >seq20 Length=575516 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| Sbjct 427882 AGCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGAC 427941 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 427942 CCCCGCATCGGGC 427954 >seq8 Length=1257856 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| Sbjct 1252282 AGCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGAC 1252341 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 1252342 CCCCGCATCGGGC 1252354 >seq11 Length=979700 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 114741 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 114800 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 114801 CCCGCATCGGGC 114812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834521735493