Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq3 196 9e-45 seq25 178 2e-39 seq5 120 6e-22 seq2 111 3e-19 >seq3 Length=3980562 Score = 196 bits (216), Expect = 9e-45 Identities = 331/474 (70%), Gaps = 14/474 (3%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || |||||||||||||| || || |||||||||||||| |||||| | Sbjct 2739535 CATGACACCGGCCTTCTGGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCC 2739476 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| ||||||||||||||||||||| ||| | | ||| || || Sbjct 2739475 CAGGGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCACGGTAGACCTTCTCGTTGCC 2739416 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || || | |||||| || ||||||||||||||||| |||| |||| |||||| Sbjct 2739415 GAGAGCGACGAGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTT 2739356 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||||| || | |||||| | || ||| || ||| |||| |||| | ||| | Sbjct 2739355 CATGCCAAGCAGGGCGCAGGGCAGAGCCTCGGTAAGGAACTCCTGTTCGATCTTGACAG- 2739297 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAGGGAC-AGCT-----TGTTCTCGAGCTTCGA 10228 | |||| |||| ||| || || | || | ||| ||||| ||| | || Sbjct 2739296 --CATCGATGATGATCT---CCTCGACGAGCTTCTTGCTGGGGCGGTTCTTGAGGTGGGA 2739242 Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288 ||||||| |||| | ||||||||||||||| || ||||| ||||||||| Sbjct 2739241 GAACAGGAGGCAGGCAAAGTCAGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGA 2739182 Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348 || || ||||||||||| || || || |||||||| |||| | ||| | || Sbjct 2739181 GAAGGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACC 2739122 Query 10349 GGAGAACAGAAGACCCTCCA-CGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 | ||| | | |||||| | |||| | |||| | |||||||| ||||||| Sbjct 2739121 GCTGAAGAAGATACCCTCGACCGCA-GCAAAGGCAATGAGGCGCTGAGCGAAGG 2739069 Score = 127 bits (140), Expect = 4e-24 Identities = 156/210 (74%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 224961 GGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGT 225020 |||| | ||| |||||| |||||||||| |||||||||||||||| | ||||| || Sbjct 737600 GGTCATCGCCGTTGGCATAACGCCACTGGAGGTACTGGTTGGGGGTCTTCTCCAGATGCA 737541 Query 225021 TCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCC 225080 |||||| || | || ||||||||| | ||| | || |||| |||||| |||||| Sbjct 737540 TCTCAACGTGCTCGAGAGCATGCTGCTTGATGTATCCGATACGCAGGTTGGGGTGCTTCT 737481 Query 225081 ACACAGAGCCCCGAGTC--GGTTGTG-CCTCGCCGGTGAGGACCTTGATGAGCGTAGTCT 225137 || || |||| || || ||||||| ||||| | |||||||||||| | || Sbjct 737480 CAACCTTTCC---AGTCGTGGGGATGACCTCGCCCGTGAGAATCTTGATGAGCGTCGACT 737424 Query 225138 TGCCCGCACCATTGGGGCCAATCACGCCAA 225167 |||| ||||| || || ||||||||| ||| Sbjct 737423 TGCCTGCACCGTTAGGTCCAATCACGGCAA 737394 Score = 86.0 bits (94), Expect = 1e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 10622 CAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAA 10681 ||||||||| | || ||||| || | | || |||||| | ||||||||| |||||| Sbjct 2738778 CAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCCAGGATGTGCGAGATGAA 2738719 Query 10682 GTGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGAC 10741 || |||||| ||||| | || | |||||| | ||||| | ||| | || Sbjct 2738718 GTACTTCTCATCCTCGTTGATCTTGTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCGAT 2738659 Query 10742 CTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 |||||| | |||||||||| || |||||||||||||||| || Sbjct 2738658 CTCCTCGGCAGTCCAGAAAGATGCCTCGGCCTTCTTGTACATTTG 2738614 >seq25 Length=380168 Score = 178 bits (196), Expect = 2e-39 Identities = 179/233 (77%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| ||||| || || | || | ||| || |||||||| || |||||||| || |||| Sbjct 211728 TTCCACCGCGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGG 211669 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 ||||||| || || || || | |||||| || ||||| ||||| | || || ||||| | Sbjct 211668 AGAGTGTTCTTCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAG 211609 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || || |||||||| || ||||| ||||||| ||||||||||| | || || | Sbjct 211608 GGATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGA 211549 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 | || | |||||||| || ||||| |||||||||||||| |||||||| ||| Sbjct 211548 CCTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATGATG 211496 Score = 176 bits (194), Expect = 8e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || |||||||| |||| ||| | || ||||| || |||||||| || ||| Sbjct 212182 CCACCACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 212123 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| |||||||| || ||||| ||||| | || ||||| || ||| Sbjct 212122 AGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 212063 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||| || ||||||||||| | || || || Sbjct 212062 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAGACTCCACC 212003 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| |||||||| ||||| ||||| ||||||||||| |||||||| Sbjct 212002 TCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956 Score = 123 bits (136), Expect = 5e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | || || || ||||| || |||||||| || || || Sbjct 211954 CCACCGCGCAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 211895 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | |||||| || || || ||||| | || || ||||| || Sbjct 211894 AAGGTACGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAGGG 211835 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||||||| |||||||| || | || || || Sbjct 211834 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCGACC 211775 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | || ||||| || || || | |||||||||||| ||||||||| Sbjct 211774 TCAAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATT 211727 >seq5 Length=2741173 Score = 120 bits (132), Expect = 6e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || || || || |||| || || || | |||||| |||||||| || Sbjct 2268399 TTCTGGATGTTGTAGTCAGACAGAGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 2268340 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || || ||||| ||||| || || ||||| | |||||| ||| Sbjct 2268339 AGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 2268280 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | |||||| || || ||||| |||||||| ||||| Sbjct 2268279 ATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 2268221 >seq2 Length=4043926 Score = 111 bits (122), Expect = 3e-19 Identities = 143/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| |||||| |||||| |||||| || |||||| |||||| Sbjct 632788 CGCCACTGGATGTACTCCGAAGGGGTCTTGTCCAAGTGGTTGTCGATATGGGCGAAAGCG 632847 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGT-CGG 225099 ||||| | ||| || || || ||||| |||| | | ||| | || || Sbjct 632848 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTGGGTGGGG 632907 Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || | ||| || |||||||| ||||| || |||| |||||| ||||||||||||||||| Sbjct 632908 ATGAG-CTCACCAGTGAGGACGTTGATCAGGGTAGACTTGCCAGCACCATTGGGGCCAAT 632966 Query 225160 CACGCCAATCCGGGA 225174 ||| |||| || || Sbjct 632967 GACGGCAATACGCGA 632981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921620406991560