Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq3 196 9e-45
seq25 178 2e-39
seq5 120 6e-22
seq2 111 3e-19
>seq3
Length=3980562
Score = 196 bits (216), Expect = 9e-45
Identities = 331/474 (70%), Gaps = 14/474 (3%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || |||||||||||||| || || |||||||||||||| |||||| |
Sbjct 2739535 CATGACACCGGCCTTCTGGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCC 2739476
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
||||| ||| ||||||||||||||||||||| ||| | | ||| || ||
Sbjct 2739475 CAGGGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCACGGTAGACCTTCTCGTTGCC 2739416
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || || | |||||| || ||||||||||||||||| |||| |||| ||||||
Sbjct 2739415 GAGAGCGACGAGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTT 2739356
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||||| || | |||||| | || ||| || ||| |||| |||| | ||| |
Sbjct 2739355 CATGCCAAGCAGGGCGCAGGGCAGAGCCTCGGTAAGGAACTCCTGTTCGATCTTGACAG- 2739297
Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAGGGAC-AGCT-----TGTTCTCGAGCTTCGA 10228
| |||| |||| ||| || || | || | ||| ||||| ||| | ||
Sbjct 2739296 --CATCGATGATGATCT---CCTCGACGAGCTTCTTGCTGGGGCGGTTCTTGAGGTGGGA 2739242
Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288
||||||| |||| | ||||||||||||||| || ||||| |||||||||
Sbjct 2739241 GAACAGGAGGCAGGCAAAGTCAGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGA 2739182
Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348
|| || ||||||||||| || || || |||||||| |||| | ||| | ||
Sbjct 2739181 GAAGGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACC 2739122
Query 10349 GGAGAACAGAAGACCCTCCA-CGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401
| ||| | | |||||| | |||| | |||| | |||||||| |||||||
Sbjct 2739121 GCTGAAGAAGATACCCTCGACCGCA-GCAAAGGCAATGAGGCGCTGAGCGAAGG 2739069
Score = 127 bits (140), Expect = 4e-24
Identities = 156/210 (74%), Gaps = 6/210 (3%)
Strand=Plus/Minus
Query 224961 GGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGT 225020
|||| | ||| |||||| |||||||||| |||||||||||||||| | ||||| ||
Sbjct 737600 GGTCATCGCCGTTGGCATAACGCCACTGGAGGTACTGGTTGGGGGTCTTCTCCAGATGCA 737541
Query 225021 TCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCC 225080
|||||| || | || ||||||||| | ||| | || |||| |||||| ||||||
Sbjct 737540 TCTCAACGTGCTCGAGAGCATGCTGCTTGATGTATCCGATACGCAGGTTGGGGTGCTTCT 737481
Query 225081 ACACAGAGCCCCGAGTC--GGTTGTG-CCTCGCCGGTGAGGACCTTGATGAGCGTAGTCT 225137
|| || |||| || || ||||||| ||||| | |||||||||||| | ||
Sbjct 737480 CAACCTTTCC---AGTCGTGGGGATGACCTCGCCCGTGAGAATCTTGATGAGCGTCGACT 737424
Query 225138 TGCCCGCACCATTGGGGCCAATCACGCCAA 225167
|||| ||||| || || ||||||||| |||
Sbjct 737423 TGCCTGCACCGTTAGGTCCAATCACGGCAA 737394
Score = 86.0 bits (94), Expect = 1e-11
Identities = 118/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 10622 CAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAA 10681
||||||||| | || ||||| || | | || |||||| | ||||||||| ||||||
Sbjct 2738778 CAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCCAGGATGTGCGAGATGAA 2738719
Query 10682 GTGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGAC 10741
|| |||||| ||||| | || | |||||| | ||||| | ||| | ||
Sbjct 2738718 GTACTTCTCATCCTCGTTGATCTTGTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCGAT 2738659
Query 10742 CTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786
|||||| | |||||||||| || |||||||||||||||| ||
Sbjct 2738658 CTCCTCGGCAGTCCAGAAAGATGCCTCGGCCTTCTTGTACATTTG 2738614
>seq25
Length=380168
Score = 178 bits (196), Expect = 2e-39
Identities = 179/233 (77%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| ||||| || || | || | ||| || |||||||| || |||||||| || ||||
Sbjct 211728 TTCCACCGCGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGG 211669
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
||||||| || || || || | |||||| || ||||| ||||| | || || ||||| |
Sbjct 211668 AGAGTGTTCTTCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAG 211609
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| || || |||||||| || ||||| ||||||| ||||||||||| | || || |
Sbjct 211608 GGATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGA 211549
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
| || | |||||||| || ||||| |||||||||||||| |||||||| |||
Sbjct 211548 CCTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATGATG 211496
Score = 176 bits (194), Expect = 8e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || |||||||| |||| ||| | || ||||| || |||||||| || |||
Sbjct 212182 CCACCACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 212123
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| |||||||| || ||||| ||||| | || ||||| || |||
Sbjct 212122 AGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 212063
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||| || ||||||||||| | || || ||
Sbjct 212062 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAGACTCCACC 212003
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| |||||||| ||||| ||||| ||||||||||| ||||||||
Sbjct 212002 TCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956
Score = 123 bits (136), Expect = 5e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || || | || | || || || ||||| || |||||||| || || ||
Sbjct 211954 CCACCGCGCAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 211895
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | ||||| || | |||||| || || || ||||| | || || ||||| ||
Sbjct 211894 AAGGTACGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAGGG 211835
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| ||||||| |||||||| || | || || ||
Sbjct 211834 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCGACC 211775
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| | || ||||| || || || | |||||||||||| |||||||||
Sbjct 211774 TCAAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATT 211727
>seq5
Length=2741173
Score = 120 bits (132), Expect = 6e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || || || || |||| || || || | |||||| |||||||| ||
Sbjct 2268399 TTCTGGATGTTGTAGTCAGACAGAGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 2268340
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || || ||||| ||||| || || ||||| | |||||| |||
Sbjct 2268339 AGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 2268280
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | || || || || | |||||| || || ||||| |||||||| |||||
Sbjct 2268279 ATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 2268221
>seq2
Length=4043926
Score = 111 bits (122), Expect = 3e-19
Identities = 143/195 (73%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||||||||||| |||||| |||||| |||||| || |||||| ||||||
Sbjct 632788 CGCCACTGGATGTACTCCGAAGGGGTCTTGTCCAAGTGGTTGTCGATATGGGCGAAAGCG 632847
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGT-CGG 225099
||||| | ||| || || || ||||| |||| | | ||| | || ||
Sbjct 632848 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTGGGTGGGG 632907
Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
|| | ||| || |||||||| ||||| || |||| |||||| |||||||||||||||||
Sbjct 632908 ATGAG-CTCACCAGTGAGGACGTTGATCAGGGTAGACTTGCCAGCACCATTGGGGCCAAT 632966
Query 225160 CACGCCAATCCGGGA 225174
||| |||| || ||
Sbjct 632967 GACGGCAATACGCGA 632981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921620406991560
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