Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq22 453 2e-122 seq3 284 2e-71 >seq22 Length=534521 Score = 453 bits (502), Expect = 2e-122 Identities = 1243/1886 (66%), Gaps = 51/1886 (3%) Strand=Plus/Minus Query 243761 GCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGG 243820 || |||| ||| | ||||||||||||||||||||||| || |||| | || | Sbjct 118466 GCAGCCTGGGTACGAAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGTGAAG 118407 Query 243821 TGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTG 243880 |||||| || | ||| ||| | |||| ||||| || || ||| Sbjct 118406 TGCATGCTGGTGATCTTGCCCAT-------TGTGGG--GTCCTT---CATGTGGATGTTC 118359 Query 243881 AGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG-GTCCTT 243939 || |||||| ||| || | || | | || || || ||||| | || ||||| Sbjct 118358 AGAGACTGGGACTGATCAATAAAAGCACCGCGGTCGGCAGCCATTTGCACGACTGTCCT- 118300 Query 243940 CTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGAT 243999 |||||| ||||| | | |||||||||| | ||||| | |||||| ||| Sbjct 118299 CTGAGAGATCTCCCAGACGGTCTTGTAGAGAGCCTTGACATCGGCGGGGATGTTGGGGAT 118240 Query 244000 GTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCC 244059 |||||| || || || | | | |||| || | |||| | || ||| || || Sbjct 118239 GTTCTGAACAGAACCGCCCTCGGCAATGATGCGGTTCTTCATGCTGTCAGACCAGAGACC 118180 Query 244060 CAAGCGCTCCAGCGCCTCGACCAGGTGCCT---GTTCACCACCTGAAACTCTCCCGACAG 244116 || | | || ||| || || ||| ||| || ||||| || || || | || Sbjct 118179 CATGTCGACAAGGTCCTTGA---GGAGCCAAGGGTTGACGACCTGGAAGTCACCTGCGAG 118123 Query 244117 CACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTAT 244176 ||| || ||| ||||| ||| | || ||||| | || ||| ||||||| || || Sbjct 118122 CACACGACGCGAGTAGATGTTTGAGGTGTAAGGCTCAAAGCACTCGTTGTTGCCGAGAAT 118063 Query 244177 CTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCT 244236 ||| | || || ||||| |||||||| | ||||||| |||||| | || || ||| Sbjct 118062 CTGGGAGGTACTGGCAGTAGGCATGGGGGCGACCAGCAAACTGTTGCGGACACCATGCTC 118003 Query 244237 CTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAG 244296 || ||| | |||| | ||||||||| ||| ||| | | ||| Sbjct 118002 CTTGATCTGCTCCTTGAGGCTGGCCCAGTCCCA---------GAGATCCGTGGGGGTGAC 117952 Query 244297 GCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTA 244356 ||||||||| |||| || | |||| ||| || ||||||||| || | ||| Sbjct 117951 ATTCCACATGTCGTACTGGAGGATACCCTGCGAGACAGGAGAGCCCTCGTAAGTGGAGTA 117892 Query 244357 GGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCT 244415 || || | || ||| || | || || || || |||| ||||||||||| Sbjct 117891 AGGGCCATGCTCCTTGGCGCACTCCATAGAGGCAGTA-AGCGCAGCGTGGTAGATGGTCT 117833 Query 244416 CGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCA 244475 |||||||| |||||| | | | |||| | | ||| || |||| || | Sbjct 117832 CGAAGATCTGCTTGTTGAGCTGTCTAGCCTCGGGAGACTCGAAAGGCATGCGCAGAGCAA 117773 Query 244476 TGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGC 244535 |||| | ||||| || ||||| || |||| |||||||| | ||| ||| ||||| | Sbjct 117772 GGAAGGCATCGGCGAGACCCTGAACACCGAGACCGATGGGGCGGTGGCGCATGTTGCTGT 117713 Query 244536 GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGA 244595 ||| || |||||||||| ||||| || || | |||||| |||||||| | Sbjct 117712 TGCGGGCCTCCTGCACGGGGTAGTAGTTGATATCAATGATCTTGTTCAGGTTGCGAACAA 117653 Query 244596 TCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGG 244655 | | ||| |||||| ||| ||| |||||||| || ||||| | | | Sbjct 117652 TGACACGGGTAACGTCGTGGAGCTTCTGGAAGTCGTAGACGG------CCTCGTTG-TAG 117600 Query 244656 TGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCG 244715 | | || |||| | || || | | |||| |||||||| || ||||| || | Sbjct 117599 TCA-----ACGAACTGGGGCAGAGCCAGGGAAGCCAAATTGCAGACAGCGACCTCATCGG 117545 Query 244716 AGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCT 244775 | | ||||| || ||||| ||||||||||| || |||||| |||| || || Sbjct 117544 GGGCAGAGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAAGTTCT 117485 Query 244776 GGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGA 244835 || ||| |||| |||| || ||||||||||||||||| || |||||||| Sbjct 117484 TCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATGAAAGGGTTACCGGTCTCAG 117425 Query 244836 GCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGC 244895 ||| || |||||| | || ||| || | | ||||||| | || ||| | | Sbjct 117424 TCTGAGCCTCGAGGATGGCGTACCACAGCTTCTGGGCCTTGATCTTCTGACGACCACGAC 117365 Query 244896 CCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGC 244955 |||| |||||||| |||||| |||||||||||| ||| | || ||| | |||| Sbjct 117364 CCTCGGCCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCGCCGTACACATCGGCGAGGC 117305 Query 244956 CGGGGCACGACGCCGGG-CACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATG 245014 | |||||| || ||| ||||||||| ||||||||||| | || ||| | || |||| Sbjct 117304 CAGGGCACT-CGTTGGGACACATGAGAGTCCACTCGCCGTTCTTCTCGACACGCTTCATG 117246 Query 245015 AAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCA 245074 || |||||||| ||||||||||| ||||||| || | || | ||| ||| ||| Sbjct 117245 AACAGGTCGGGAATCCAGAGGGCGAGGAAGAGATCACGGGCACGGATCTCCTCCTTGCCG 117186 Query 245075 GTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACA 245134 |||||| | || || | || |||||||| || ||||||||||||| | ||| | Sbjct 117185 TGGTTCTTGCGGAGGTCGAGGAACTCAAAGACATCCGCGTGCCAGGGCTCGAGGTAAATG 117126 Query 245135 GCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAA 245193 |||| ||||| || | ||||||||| |||||||| || || | || | |||||| Sbjct 117125 GCGAAAGCGCCAGGTCTCTTGTTGCCGCCCTGGTCGACGTATCTGGC-AGTGTTGTTGAA 117067 Query 245194 GATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCC 245253 || ||||| | || || |||||||| ||| ||||||||||| ||||||| ||| Sbjct 117066 GACACGCAGCATGGGAACAATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCC 117007 Query 245254 CTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGC 245313 | | | || | | |||| || || | || || || ||||||||| | ||| Sbjct 117006 GGTAGCACGGATGCGGTGGATGTTCAGACCAATACCACCAGCCATCTTGGAGATCATGGC 116947 Query 245314 GCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAA 245373 ||| |||||| ||||| ||||| || ||||| || |||||||| || || || Sbjct 116946 ACAGGTCTTGAGAGTGTCATAGATGCCGTCAATGCTATCATCCTTCATGTCGACAAGGAA 116887 Query 245374 GCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGT 245433 |||||| || ||||| | || ||| | | | ||||||||| ||||| ||| || || Sbjct 116886 GCAGGACGAAAGCTGAGCCTGGGGAGTACCAGCGTTGAACAGGGTGGGAGAGGCATGTGT 116827 Query 245434 AAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTG 245493 ||||| ||| || | || ||| |||| | | | || |||| ||||||||| Sbjct 116826 GAAGTACTTGCTTGACATGAGGTTGTAAGTCTCAATGACACGCTCAATGTCGTCGCCGTG 116767 Query 245494 GAT-CTGCAGGGCGCACCTCATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGT- 245551 ||| | | | | || | ||||| |||||||||| ||||| | || | | | Sbjct 116766 GATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTCGA-CGATCTTGCCGTTG 116709 Query 245552 CCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCG 245611 |||||||| ||| ||||||||||| |||||||| ||||||||| |||| |||||| Sbjct 116708 AGCTTGAGCAGGTATGAGCGCTCGAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCG 116649 Query 245612 GCGTGGTGCCTGACGGCTGCGTCGAG 245637 || || | | ||| | |||||| Sbjct 116648 CGGTCGTACACAATGGCCGAGTCGAG 116623 >seq3 Length=3980562 Score = 284 bits (314), Expect = 2e-71 Identities = 379/521 (73%), Gaps = 18/521 (3%) Strand=Plus/Plus Query 42633 CCCTGC-ATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAAC 42691 |||||| ||| |||||||| |||||||| || || |||||| | || | || Sbjct 2739010 CCCTGCCATCCGCAAGAAGGCCGACTGGGCTCTGAAGTGGATCTCCGACCGGGAGTCTAC 2739069 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 |||| || | || | |||||| | || |||||||| ||||||||| || ||||| Sbjct 2739070 CTTCGCTCAGCGCCTCATTGCCTTTGCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTT 2739129 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 |||||||||||||||||||||| || || || |||||||| ||||||||||| |||| Sbjct 2739130 CGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTC-ATGCCCGGCCTCACCTTCTCCAACG 2739188 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 | |||||| | |||||||| || || | ||||||||||||||||||||||| || Sbjct 2739189 AGCTCATCTCGCGTGACGAGGGCCTCCACACTGACTTTGCCTGCCTCCTGTTCTC---CC 2739245 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 |||||| | || ||| ||| ||| ||| || ||||||| || || || ||| Sbjct 2739246 ACCTCAAGAACCGCCCCAGCAAGAAGCTCGTCGAGGAGATCATCATCGATGCTGTCAAGA 2739305 Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACC 42990 |||| |||||||||| || || | |||||| ||||| | ||||||||| ||| Sbjct 2739306 TCGAACAGGAGTTCCTTACCGAGGCTCTGCCCTGCGCCCTGCTTGGCATGAACTCGAACC 2739365 Query 42991 TCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC- 43049 ||||| |||||||| ||| ||||||||||| ||||| | | |||| || Sbjct 2739366 TCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTCCT------CGTCGCTCTCGGCA 2739419 Query 43050 -CG----CCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGG 43104 || ||||| | | |||||| ||||| |||||||||||||| ||| | Sbjct 2739420 ACGAGAAGGTCTACCGTGCCACCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGGCG 2739479 Query 43105 GCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||||||| |||||||||||||||| ||| |||||| Sbjct 2739480 GCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAGTACCAG 2739520 Score = 143 bits (158), Expect = 5e-29 Identities = 235/335 (70%), Gaps = 9/335 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || || |||||| ||||||||||| || || Sbjct 2738608 ATCTGGCAAATGTACAAGAAGGCCGAGGCATCTTTCTGGACTGCCGAGGAGATCGATCTC 2738667 Query 42360 GCCAAGGACACGGCCGGCTGGGAGT-CACTGTCT--GAGAACGAAAAGTTTTTCCTCAAA 42416 ||||||| || |||| | || || ||| | || |||| ||| || Sbjct 2738668 TCCAAGGATCTCCACGACTGGAACAACAAGATCAACGAGGATGAGAAGTACTTCATCTCG 2738727 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 |||| |||||||||||||||||||| |||||||| ||||| |||||||||| | | Sbjct 2738728 CACATCCTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCGC 2738787 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 |||| ||||| ||| ||||||||||||||||||||||||||||| || Sbjct 2738788 TTCAGCGGCGAGGTCCAGATTCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGATG 2738847 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCC 42593 |||||| | ||||| ||| ||| | ||||||| |||| ||| || ||| ||| Sbjct 2738848 GAGAACATCCACTCCGAGACCTACTC---GCTGCTCATTGACACCTACGTCAAGGAGCCC 2738904 Query 42594 GTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628 | | |||| | | ||||||| ||||| || || Sbjct 2738905 GCCCAGCGGACCCACTTGTTCAACGCCATTGACAC 2738939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337157866480