Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq25 129 1e-24
seq5 93.3 1e-13
seq3 86.0 1e-11
>seq25
Length=380168
Score = 129 bits (142), Expect = 1e-24
Identities = 170/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||||||||| | || ||||| || | ||| || || ||||| || |||||||
Sbjct 211727 TCCACCGCGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 211668
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
||| || | |||||| || | || || || |||||||| || ||||| ||| ||
Sbjct 211667 GAGTGTTCTTCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGG 211608
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTA 288424
||| || || || |||||||| || ||| || ||||| || || | || || || |
Sbjct 211607 GATACCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGA 211549
Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
| || || ||||| ||||| || ||||| ||||||||||| |||||||| |||
Sbjct 211548 CCTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATGATG 211496
Score = 109 bits (120), Expect = 1e-18
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| || | || |||||||| | || || || ||||| || ||||| |
Sbjct 211954 CCACCGCGCAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 211895
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || || || || | || || || || ||||| || ||||| ||| |||
Sbjct 211894 AAGGTACGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAGGG 211835
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| || || || |||||||| || ||| || ||||| || || | |||| ||| || ||
Sbjct 211834 ATACCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTATCGGACGACTCGAC 211776
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || || || ||||| ||||||| ||||||||||| |||||||||
Sbjct 211775 CTCAAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATT 211727
Score = 107 bits (118), Expect = 5e-18
Identities = 141/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || |||||| || ||||| || ||||| || || || || ||||||
Sbjct 212146 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAG 212087
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || ||||| || || ||| || || || || |||||||| || | |||||
Sbjct 212086 ATGAGGCGCTGCTGG---TCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTCACA 212030
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| || || || || || ||||| ||||| || || |||||||||
Sbjct 212029 TTATCGATGGTGTCGGAAGACTCCACCTCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTG 211970
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 211969 ACGAAGATCTGCAT 211956
Score = 105 bits (116), Expect = 2e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || |||||| || ||||| || ||||| | || || || || |||
Sbjct 212374 TCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAG 212315
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| ||| ||||| || || || ||||| || || | || |||||
Sbjct 212314 ATAAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 212255
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || |||||| ||||| || ||||| ||||| || || |||||||||||
Sbjct 212254 TCAATGGTGTCCGACGATTCAACTTCCAGGGTGATGGTCTTGCCAGTAAGAGTCTTGACA 212195
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 212194 AAAATTTGCAT 212184
>seq5
Length=2741173
Score = 93.3 bits (102), Expect = 1e-13
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||| | || || || ||||| || | || || || |||||||||
Sbjct 2268399 TTCTGGATGTTGTAGTCAGACAGAGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 2268340
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| ||||| || ||||| || || ||||||||||| || | || || || ||
Sbjct 2268339 AGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 2268280
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | ||| ||| || || || || ||||| ||||| || ||||| ||||| |||||
Sbjct 2268279 ATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 2268221
>seq3
Length=3980562
Score = 86.0 bits (94), Expect = 1e-11
Identities = 171/251 (68%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 269091 CATAATGGAAGCAGTTACAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTAT 269150
||| || || || || | | |||| | |||||| || || ||| | || || | |
Sbjct 2739286 CATCATCGATGCTGTCAAGATCGAACAGGAGTTCCTTACCGAGGCTCTGCCCTGCGCCCT 2739345
Query 269151 GATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTT 269210
| | || ||||| | | |||||||| || || ||||| ||||| || || || || |
Sbjct 2739346 GCTTGGCATGAACTCGAACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTCCT 2739405
Query 269211 CACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACT 269270
| || ||||| | ||||| || ||| | | | || ||||| | ||| |||||
Sbjct 2739406 CGTCGCTCTCGGCAACGAGAAGGTCTACCGTGCCACCAACCCCTTTGACTTCATGGAGAA 2739465
Query 269271 AATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA-ACGTC 269329
|| || || | || ||||| ||||||||||| ||||| ||| |||| || || | | |
Sbjct 2739466 CATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAGTACCAGAAGGC 2739525
Query 269330 CTGGTGTAATG 269340
| ||||| |||
Sbjct 2739526 C-GGTGTCATG 2739535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179651785222294
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |