Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3 129 1e-24 >seq3 Length=3980562 Score = 129 bits (142), Expect = 1e-24 Identities = 182/253 (72%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 ||||||| || || || | | |||| |||| ||| || ||| ||| | || ||| Sbjct 2739284 ATCATCATCGATGCTGTCAAGATCGAACAGGAGTTCCTTACCGAGGCTCTGCCCTGCGCC 2739343 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || ||||||||||||| | |||||| ||||||||||| ||||| ||||||||| | Sbjct 2739344 CTGCTTGGCATGAACTCGAACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTC 2739403 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || |||| || || | ||||| || ||| ||| |||||||||| ||| |||||| Sbjct 2739404 CTCGTCGCTCTCGGCAACGAGAAGGTCTACCGTGCCACCAACCCCTTTGACTTCATGGAG 2739463 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACG 243740 ||| || || || || || ||||||||||| ||||| ||| | || || || | | Sbjct 2739464 AACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAGTACCAGAAG 2739523 Query 243741 CCCTGGTGTGATG 243753 || ||||| ||| Sbjct 2739524 GCC-GGTGTCATG 2739535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102877555397550