Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq25 111 2e-19
seq9 105 7e-18
>seq25
Length=380168
Score = 111 bits (122), Expect = 2e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | || || ||||| | || || || || || |||||||| || |
Sbjct 211955 ACCACCGCGCAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 211896
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| || | || || ||||||||||| ||| | ||||| |||||||| ||||||||
Sbjct 211895 CAAGGTACGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAGG 211836
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| || || | ||||| | || ||
Sbjct 211835 GATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCGAC 211776
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| | ||| | ||||||||||||||| || || ||||| || ||||||
Sbjct 211775 CTCAAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATT 211727
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | | ||| || || | || || || || || |||||||| ||
Sbjct 212183 ACCACCACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTAGTCGCT 212124
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | ||||| | ||||||||| || | ||||| ||||||||||| || ||
Sbjct 212123 CAGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGG 212064
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||| ||| || | || || | |||||
Sbjct 212063 AATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAGACTCCAC 212004
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||| | |||||| || || | ||| || ||||| || |||||
Sbjct 212003 CTCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | || || | |||| || |||||||||||
Sbjct 211696 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTTCTTCCGTCCTCGAGCTGCTTGCCA 211637
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | ||||| |||||||| |||||||| || || || || || || || || |||
Sbjct 211636 GCGAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATCTTGCTCTTG 211577
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | || || || || || || | ||| | ||||||||| |||| ||
Sbjct 211576 ACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTCAGGGTC 211517
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 211516 TTGACGAAGATCTGCAT 211500
>seq9
Length=1091098
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| ||| ||||| || || | ||||| || || || |||||||| || |
Sbjct 140799 ACCACCACGCAGTCTCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 140740
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||| | || || |||||||||||||| | ||||| ||||||||||| || ||
Sbjct 140739 GAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 140680
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||| || || | || || | |||||
Sbjct 140679 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGACGACTCCAC 140620
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||| |||| || || ||||| || |||||
Sbjct 140619 CTCGAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 140572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499643719518120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |