Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq25 116 4e-21
seq9 104 2e-17
>seq25
Length=380168
Score = 116 bits (128), Expect = 4e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| |||| || ||||| ||| || ||||| || |||
Sbjct 212380 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCCAGCTGCTTACCA 212321
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||| | ||||||||||| || || ||||||||||||||| || || ||||
Sbjct 212320 GCAAAGATAAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 212261
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| || | |||||||| || ||||| | ||| | || ||||| || |||||
Sbjct 212260 ACGTTG-TCAATGGTGTCCGACGATTCAACTTCCAGGGTGATGGTCTTGCCAGTAAGAGT 212202
Query 127096 TTTTACAAAAATCTGCAT 127113
|| |||||||| |||||
Sbjct 212201 CTTGACAAAAATTTGCAT 212184
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||||||||| || | || ||||| || || || ||||| |||| |
Sbjct 212182 CCACCACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 212123
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || | ||| || |||||| |||| | |||||||| || || ||
Sbjct 212122 AGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 212063
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||||||| ||| || ||| | | |||| |||||| | | ||| ||
Sbjct 212062 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAGACTCCACC 212003
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || || || || ||||| || || || ||||||||
Sbjct 212002 TCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
||||||||| | || | || | || | || ||||| || || || ||||| |||
Sbjct 211727 TCCACCGCGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 211668
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || | || || ||||| || |||||| |||| | |||||||||||||||||
Sbjct 211667 GAGTGTTCTTCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGG 211608
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064
|| |||||||||||| ||| || ||||| |||| |||| |||||||| |||||
Sbjct 211607 GATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG-TCGATGGTGTCCGAGGACTCGA 211549
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
| || | || | || ||||| ||||| || || || || |||||||||
Sbjct 211548 CCTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATG 211499
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | || | ||| | |||||||| || || || ||||| || |
Sbjct 211954 CCACCGCGCAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 211895
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || ||||| || ||||| |||| | |||||||||||||||||
Sbjct 211894 AAGGTACGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAGGG 211835
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||||||| ||| || ||||| |||| |||| ||| || | ||||||
Sbjct 211834 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG-TCGATGGTATCGGACGACTCGAC 211776
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || |||||||||| || || || || ||||||||
Sbjct 211775 CTCAAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 211728
>seq9
Length=1091098
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || || ||| | || | || ||||| || || || ||||| ||
Sbjct 140798 CCACCACGCAGTCTCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 140739
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || || ||| |||| | |||||||| || || ||
Sbjct 140738 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 140679
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| ||| || ||||| |||| |||| ||||| | ||| ||
Sbjct 140678 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TCGATAGTGTCGGACGACTCCAC 140620
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|||| ||| | || ||||| ||||| || || || || |||||||||
Sbjct 140619 CTCGAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATG 140571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499771729520
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