Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq22 206 3e-48 seq4 96.9 4e-15 seq3 86.0 8e-12 >seq22 Length=534521 Score = 206 bits (228), Expect = 3e-48 Identities = 1116/1752 (64%), Gaps = 59/1752 (3%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| || |||||||| || |||||||| || | ||||| || Sbjct 118454 CGAAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGTGAAGTGCATGCTGGTG 118395 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | ||| || | |||| || ||||| | ||||| ||||| || || Sbjct 118394 ATCTTGCCCATTGTGGGGTCCTTCATGTGGATGTTCAGAGACTGGGACTGATCAATAAAA 118335 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGTT 115734 || || || || ||||| | ||| | || ||| ||| ||||| || || Sbjct 118334 GCACCGCGGTCGGCAGCCATTTG---CACGACTGTCCTCTGAGAGATCTCCCAGACGGTC 118278 Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794 ||||||| ||| | ||| | ||||| | ||| || || | ||| || || | Sbjct 118277 TTGTAGAGAGCCTTGACATCGGCGGGGATGTTGGGGATGTTCTGAACAGAACCGCC---C 118221 Query 115795 TTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCC 115851 | | | |||| | | |||||| | ||||||||||| || | || |||| Sbjct 118220 TCGGCAATGATGCGGTTCTTCATGCTGTCAGACCAGAGACCCATGTCGACAAGGTCCTT- 118162 Query 115852 ACGAGGTGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATG 115908 |||| || | ||||| || || ||||| ||||| || | | |||||| Sbjct 118161 --GAGGAGCCAAGGGTTGACGACCTGGAAGTCACCTGCGAGCACACGACGCGAGTAGATG 118104 Query 115909 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 115968 || | ||||| |||||||||||||| ||||| || | || |||| || ||| || Sbjct 118103 TTTGAGGTGTAAGGCTCAAAGCACTCGTTGTTGCCGAGAATCTGGGAGGTACTGGCAGTA 118044 Query 115969 GGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGG 116028 |||||||| || | || | |||||||||| ||| | || | || | ||||||||| Sbjct 118043 GGCATGGGGGCGACCAGCAAACTGTTGCGGACACCATGCTCCTTGATCTGCTCCTTGAGG 117984 Query 116029 GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCT 116088 | ||||||| || | | | | | |||||| || ||||||||||||| Sbjct 117983 CTGGCCCAGTCCCAGAGATCCGTGGGGGTGACATTCCACATGTCGTACTGGAGGATACCC 117924 Query 116089 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC-CAATTCGGA 116147 || || | || || ||||| | || || ||||| | ||| || || | | | Sbjct 117923 TGCGAGACAGGAGAGCCCTCGTAAGTGGAGTAAGGGCCATGCTCCTTGGCGCACTCCATA 117864 Query 116148 GCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGG 116206 | || || || ||||| || || ||||| || || | || | || | | | Sbjct 117863 G-AGGCAGTAAGCGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTGTC-TAG 117806 Query 116207 CCTCGTCGGAATCAAACGCGAGACGGCACA-AAATAAATACATCCGCGAGACCTTGGACA 116265 ||||| || || || | | | ||| | || || |||| |||||||| || ||| Sbjct 117805 CCTCGGGAGACTCGAAAGGCATGC-GCAGAGCAAGGAAGGCATCGGCGAGACCCTGAACA 117747 Query 116266 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAA 116325 ||||| || || ||||| || | ||| || || || || || |||||| || | Sbjct 117746 CCGAGACCGATGGGGCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGCACGGGGTAGTAG 117687 Query 116326 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACA---ACCTTTGTGATTTCATGAAGC 116382 || |||| || | | | || || ||| ||| || || | || || ||| Sbjct 117686 TTGATATCAATGATCTTGTTCAG---GTTGCGAACAATGACACGGGTAACGTCGTGGAGC 117630 Query 116383 TTTTCGTAATC-AAAACTGCGAGTCTCTTCATTG---ACATACTTAGGAAGGGCGATTGA 116438 || | | | || | || || ||| | | | || ||| || || || | || Sbjct 117629 TTCTGGAAGTCGTAGACGGC----CTCGTTGTAGTCAACGAACTGGGGCAGAGCCAGGGA 117574 Query 116439 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAA 116498 |||| ||| || |||| | |||||| ||| |||||| || || || || || | Sbjct 117573 AGCCAAATTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATGATCTCAGTGCAGAG 117514 Query 116499 ATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 116558 || || || ||||| ||||||||||| || || ||| ||| |||||||| Sbjct 117513 GTTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTT 117454 Query 116559 GTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CAT 116617 ||||||||| | || | || ||||| || || | || ||| || || | ||| | | | Sbjct 117453 GTAGAGCATGAAAGGGTTACCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCACAGCTT 117394 Query 116618 CGGCGGCTGGCAC-AGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCC 116676 | | | || | | || || | || ||||| |||||||||| ||| || ||| Sbjct 117393 CTGGGCCTTGATCTTCTGACG--ACCACGACCCTCGGCCTCGTACTTCTCGTACAGAGCC 117336 Query 116677 TCAAACTCTTCACC-CACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGA 116735 || ||||| || || ||| | || | ||| || || || | ||||| | ||||| Sbjct 117335 TCGAACTCGTCGCCGTACA-CATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAGT 117277 Query 116736 CCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAA 116795 ||| | || || ||| || ||||||||||| ||||| || |||||||| || ||| Sbjct 117276 CCACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGAA 117217 Query 116796 GAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCA 116854 |||||| | | || || | || || | || || || || | || | || || | Sbjct 117216 GAGATCACGGGCACGGATC-TCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAA 117158 Query 116855 TGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTGCGACGACCA 116910 || |||||||||||| || || ||||| | |||| | || || | | || Sbjct 117157 AGACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTG-CCG 117099 Query 116911 GCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCA 116970 |||||| || || || || || ||| || || || ||||| |||| || || | Sbjct 117098 CCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGTTG 117039 Query 116971 GATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCA 117028 || || || || || || || ||| | | | || | || |||||||| || Sbjct 117038 GAGGTACCGTTGGTGCCGGCAATGTAGGAGCC--GGTAGCACGGATGCGGTGGATGTTCA 116981 Query 117029 TACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCC 117088 ||||||||| || ||| ||| ||||| || || | ||||| || | ||||| | Sbjct 116980 GACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATGC 116921 Query 117089 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTG 117148 | || || ||| |||| | ||| ||||||||| ||| | || | | || | Sbjct 116920 CGTCAATGCTATCATCCTTCATGTCGACAAGGAAGCAGGACGAAAGCTGAGCCTGGGGAG 116861 Query 117149 TACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATC 117206 ||||||||||||| ||||| || | || || |||| || |||| ||||| | Sbjct 116860 TACCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAA-GTA-CTTGCTTGACATGAGGTT 116803 Query 117207 GTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAA 117266 ||| ||||| | |||| |||||| || ||||| || |||| || || ||||| | Sbjct 116802 GTAAGTCTCAATGACACGCTCAATGTCGTCGCCGTGGATGCCGACAGACACACGCATGAT 116743 Query 117267 CATGTATTGGGG 117278 ||||| ||||| Sbjct 116742 CATGTGCTGGGG 116731 >seq4 Length=3265764 Score = 96.9 bits (106), Expect = 4e-15 Identities = 280/424 (66%), Gaps = 18/424 (4%) Strand=Plus/Minus Query 12694 TGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGT 12753 |||| | |||||| ||||| || || || | ||| || | ||| || || || | | || Sbjct 589457 TGATGTGACGATCGAAGCGGCCCGGACGCATGAGCGCCTTGTCGAGAATGTCCACTCTGT 589398 Query 12754 TCGTCGCCGCGATGACAACGA--TGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAA 12811 | || |||| | || || | ||| || ||| | |||||| |||||||| || | Sbjct 589397 TGGTACCCGCCAGTACGACAACCTGCTCGGA-CGTGTT-GAAGCCGTCCATCTCTGTGAG 589340 Query 12812 GAGTTGATTGATGGTTTGTTCACGTTCATCATT--CGCGGGCA-------TACCACCCGC 12862 || ||||||| ||| || || || || | ||| | || | || | || Sbjct 589339 GATCTGATTGAGGGTCGCCTCCCGCTCGTCGTGGCCGCCGCCAATGTTCTTGCCTTCAGC 589280 Query 12863 ACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTC 12922 || | ||| || | |||||||| ||||| ||||| | || ||||| | | | Sbjct 589279 ACGGGC---CTTGCCAATAGCGTCAATCTCGTCGATGAAGATAATGCACGGCGCACTCTT 589223 Query 12923 ACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCAC 12982 || ||| | |||| || ||||||| |||||||||||| ||||||||||| || Sbjct 589222 GCGCGCATTGGCGAAGAGGTCACGCACTCGGGAGGCACCGACACCGACAAACATCTCTAC 589163 Query 12983 AAAATTGGCGGCG-GAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGG 13041 || | || | || || | || |||||||||| || ||||| ||| | || || Sbjct 589162 GAACTCGGAGCCGCTGACGCT-GAAGAAGGGGACGCCAGACTCACCGGCGGTAGCCTTGG 589104 Query 13042 CGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGG 13101 | || | ||||| || || || ||| || ||||||| ||| || || |||||| ||| Sbjct 589103 CAAGCATAGTCTTACCAGTACCGGGTGGTCCAGCGAGAATGGCGCCGCGGGGGATCTTGG 589044 Query 13102 CACC 13105 | || Sbjct 589043 CGCC 589040 >seq3 Length=3980562 Score = 86.0 bits (94), Expect = 8e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || |||||| ||||||||||| |||||||| || || |||||| || || Sbjct 2739228 GCAAAGTCAGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 2739169 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 |||||||| || |||||||| | |||||| || | || | || ||||||||| Sbjct 2739168 GGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATA 2739109 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 ||||| || || || |||| || |||| || |||| Sbjct 2739108 CCCTCGACCGCAGCAAAGGCAATGAGGCGCTGAGCGAAGG 2739069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505873290680