Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 147 3e-30 seq22 123 4e-23 >seq3 Length=3980562 Score = 147 bits (162), Expect = 3e-30 Identities = 290/425 (68%), Gaps = 7/425 (2%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| ||| ||| || |||||||| | || ||||| Sbjct 2739502 CTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATGAAGTCAAAGGGGTT 2739443 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | | | ||| |||| |||||||| | || | | ||| || || || || Sbjct 2739442 GGTGGCACGGTAGACCTTCTCGTTGCCGAGAGCGACGAGGAGGCGGTCGGCGACGAACTC 2739383 Query 159769 GATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 |||||| || | ||| | | |||| || || ||||| ||| || || || | Sbjct 2739382 GATGTA-CTGCTTCATGAGGTTCGAGTTCATGCCAAGCAGGGCGCAGGGCAGAGCCTCGG 2739324 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACG-TTCGTAC 159886 || ||||||| || |||| ||| || ||| | | |||| | ||| | ||| | | Sbjct 2739323 TAAGGAACTCCTGTTCGATCTTGACAGCATCGATGATGATCTCCTCGACGAGCTTCTTGC 2739264 Query 159887 CCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCC 159946 ||| | || ||| ||||||||||| |||||||| ||| || ||| Sbjct 2739263 TGGGGCGGTTCT----TGAGGTGGGAGAACAGGAGGCAGGCAAAGTCAGTGTGGAGGCCC 2739208 Query 159947 TCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTG 160006 ||||| || ||||||| ||||||||| | | ||||||| ||||||| || ||| ||| Sbjct 2739207 TCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCCGCGCTTCTTG 2739148 Query 160007 AGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCC 160066 ||||| || |||| || || |||||||| || ||||| ||||| || || ||||| || Sbjct 2739147 AGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGACCGCAGCAAAGGCA 2739088 Query 160067 ACGAG 160071 | ||| Sbjct 2739087 ATGAG 2739083 >seq22 Length=534521 Score = 123 bits (136), Expect = 4e-23 Identities = 538/829 (65%), Gaps = 28/829 (3%) Strand=Plus/Minus Query 204923 CCCACATGCTGCTGGTTAGACTTGCGGTTA-CAGGAGTCCTTGTACATCATGAACGGCAT 204981 |||| | || |||||| ||||||||| ||| | |||||||| | |||||| || | Sbjct 117494 CCCAAGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCA-TCCTTGTAGAGCATGAAAGGGTT 117436 Query 204982 TCCGTTCTCCATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCT 205040 ||| |||| |||||| ||| || ||| | ||||| | | |||| | | || Sbjct 117435 ACCGGTCTCAGTCTGAGCCTCG-AGGATGGCGTACCACAGCTTCTGGGCCTTGATCTTCT 117377 Query 205041 TCACGTACAT--CCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTA 205098 ||| || |||| | | |||||| || |||||| ||| | || || ||||| Sbjct 117376 G-ACGACCACGACCCTCG-GCCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCGCCGTA 117319 Query 205099 CACGTCCATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCAC-ATCTGATCGTCTT 205157 ||| || || || || || | ||||||||||| |||| |||| | | || || | Sbjct 117318 CACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAGTCCACTCGCCGTTCTTC-T 117260 Query 205158 TCACCCTCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAA 205217 || | || ||| ||||||||| ||||| ||| || || ||||||||||| | | Sbjct 117259 CGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGAAGAGATCACGGGCACGGA 117200 Query 205218 TTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATG---TCGGCGTGCC 205274 | | || | || ||||||| | ||| || | | ||| | || ||||||| Sbjct 117199 TCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAA---CTCAAAGACATCCGCGTGCC 117143 Query 205275 ACGGCTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCAC---CA 205331 | ||||| | | | ||| | ||||| || |||||||| || |||||||| || Sbjct 117142 AGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCCGCCCTGGTCGACGTATC 117083 Query 205332 TGCGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCG 205391 || ||| | |||||| || |||||||| || || | ||||||| ||| ||||| | Sbjct 117082 TGGCAGTGTT---GTTGAAGACACGCAGCATGGGAACAATGCCGTTGGAGGTACCGTTGG 117026 Query 205392 TGCTGTTGATGGCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAG 205451 ||| | ||| ||||| ||| | | | | |||| | ||||| || |||| Sbjct 117025 TGCCGGCAATGTAGGAGCCGGTAGCACGGATGCGGTGGATGTTCAGACCAATACCACCAG 116966 Query 205452 AACACTTGGCGATCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCG 205510 ||||| |||| ||| || ||||| |||||| |||||||| | ||| ||| Sbjct 116965 CCATCTTGGAGATCATGGCACAGGTCTTG-AGAGTGTCATAGATGCCGTCAATGCTATCA 116907 Query 205511 TCCGCCAGTGTC-ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAA 205569 ||| || |||| || || |||| || | |||| || | || || |||| ||| Sbjct 116906 TCCTTCA-TGTCGACAAGGAAGCAGGACGAAAGCTGAGCCTGGGGAGTACCAGCGTTGAA 116848 Query 205570 GAGCGTGGGGCTGGCGTGGCTGAAGCGCTT-CTCGCTCAAACACCTGTAGGTCTCCAGCA 205628 || ||||| ||| || ||||| ||| || | || |||| ||||| | | Sbjct 116847 CAGGGTGGGAGAGGCATGTGTGAAGTACTTGCTTG-ACATGAGGTTGTAAGTCTCAATGA 116789 Query 205629 CGCTCTCCAGATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTC 205688 | | ||| | ||| |||||| || || | | | | ||||| | ||| || || | Sbjct 116788 CACGCTCAATGTCGTCGCCGTGGATGCCGACAGACACACGCATGATCATGTGCTGGGGAC 116729 Query 205689 TCTCCATCACCCTCTCGTTCACCTTGAGCAGATAGGCTCTCTCTAGGGT 205737 ||| | | | | |||| | ||||||||| || | | ||| ||||| Sbjct 116728 GCTCGACGATCTTGCCGTTGAGCTTGAGCAGGTATGAGCGCTCGAGGGT 116680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153480476880