Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq9 152 6e-32 seq25 134 2e-26 seq5 131 2e-25 >seq9 Length=1091098 Score = 152 bits (168), Expect = 6e-32 Identities = 151/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || |||||||| | || |||||||||||||||||||| Sbjct 140763 CTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 140704 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||||||| |||||| ||||| ||| Sbjct 140703 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 140645 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| ||| ||||| || | ||||| || ||||||||||| || || | Sbjct 140644 TGTCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTCAGGGTCTTCA 140585 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 140584 CGAAGATCTGCAT 140572 >seq25 Length=380168 Score = 134 bits (148), Expect = 2e-26 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || || | |||| |||||||||||||| ||||| Sbjct 211691 CTCCTTCTGGATGTTGTAGTCGGAGAGTGTTCTTCCGTCCTCGAGCTGCTTGCCAGCGAA 211632 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||| |||| || | | |||||||||| |||||| |||||| ||| Sbjct 211631 GATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 211573 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || || || || | |||||||| ||||||||||| || || | Sbjct 211572 TGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTGA 211513 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 211512 CGAAGATCTGCAT 211500 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||||||||| ||||| || |||||| ||||| ||||||||| || ||||| | Sbjct 212170 CGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 212111 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || | ||||||||| ||||| || | |||||||||||| | || | || ||||||| Sbjct 212110 TCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 212051 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| |||||| ||| | | | | |||||| || ||||| |||| |||||| Sbjct 212050 TCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAGACTCCACCTCCAGAGTGATG 211991 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || || || ||||| ||||| Sbjct 211990 GTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| |||||| ||||| |||||||| || | || || | || ||| Sbjct 211936 ACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTACGGCCATCCTCG 211877 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| || || || | ||||||||| |||| || | | |||||||||| | Sbjct 211876 AGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGG 211817 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| |||||| ||| | | | || ||| ||| || || || | || ||||| || Sbjct 211816 ATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCGACCTCAAGAGTAATGGTCTT 211758 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 ||| |||| || || || ||||| |||||| Sbjct 211757 GCCGGTCAAGGTCTTGACGAAGATCTGCATT 211727 >seq5 Length=2741173 Score = 131 bits (144), Expect = 2e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| |||||||| || ||||| || |||| || ||||||||||||||||| | Sbjct 2268401 CCTTCTGGATGTTGTAGTCAGACAGAGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 2268342 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | || |||||| ||| |||||| ||||| | Sbjct 2268341 TCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 2268282 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | |||||| ||| ||||| || | ||||| || ||||||||||| || || || | Sbjct 2268281 CGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 2268222 Query 46584 AG 46585 || Sbjct 2268221 AG 2268220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237177671960