Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq9 152 6e-32
seq25 134 2e-26
seq5 131 2e-25
>seq9
Length=1091098
Score = 152 bits (168), Expect = 6e-32
Identities = 151/193 (78%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || |||||||| | || ||||||||||||||||||||
Sbjct 140763 CTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 140704
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | |||||||||||| | || | || |||||||||| |||||| ||||| |||
Sbjct 140703 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 140645
Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | |||||| ||| ||||| || | ||||| || ||||||||||| || || |
Sbjct 140644 TGTCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTCAGGGTCTTCA 140585
Query 46581 CAAAGATTTGCAT 46593
| ||||| |||||
Sbjct 140584 CGAAGATCTGCAT 140572
>seq25
Length=380168
Score = 134 bits (148), Expect = 2e-26
Identities = 147/193 (76%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || || | |||| |||||||||||||| |||||
Sbjct 211691 CTCCTTCTGGATGTTGTAGTCGGAGAGTGTTCTTCCGTCCTCGAGCTGCTTGCCAGCGAA 211632
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||| |||| || | | |||||||||| |||||| |||||| |||
Sbjct 211631 GATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 211573
Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||| || || || || | |||||||| ||||||||||| || || |
Sbjct 211572 TGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTGA 211513
Query 46581 CAAAGATTTGCAT 46593
| ||||| |||||
Sbjct 211512 CGAAGATCTGCAT 211500
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
||||||||||| ||||| || |||||| ||||| ||||||||| || ||||| |
Sbjct 212170 CGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 212111
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || | ||||||||| ||||| || | |||||||||||| | || | || |||||||
Sbjct 212110 TCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 212051
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| |||||| ||| | | | | |||||| || ||||| |||| ||||||
Sbjct 212050 TCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAGACTCCACCTCCAGAGTGATG 211991
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || || || || ||||| |||||
Sbjct 211990 GTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956
Score = 116 bits (128), Expect = 4e-21
Identities = 154/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||| | ||| |||||| ||||| |||||||| || | || || | || |||
Sbjct 211936 ACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTACGGCCATCCTCG 211877
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| || || || | ||||||||| |||| || | | |||||||||| |
Sbjct 211876 AGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGG 211817
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| |||||| ||| | | | || ||| ||| || || || | || ||||| ||
Sbjct 211816 ATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCGACCTCAAGAGTAATGGTCTT 211758
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
||| |||| || || || ||||| ||||||
Sbjct 211757 GCCGGTCAAGGTCTTGACGAAGATCTGCATT 211727
>seq5
Length=2741173
Score = 131 bits (144), Expect = 2e-25
Identities = 138/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| |||||||| || ||||| || |||| || ||||||||||||||||| |
Sbjct 2268401 CCTTCTGGATGTTGTAGTCAGACAGAGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 2268342
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||| | || | || |||||| ||| |||||| ||||| |
Sbjct 2268341 TCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 2268282
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | |||||| ||| ||||| || | ||||| || ||||||||||| || || || |
Sbjct 2268281 CGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 2268222
Query 46584 AG 46585
||
Sbjct 2268221 AG 2268220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565237177671960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |