Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 309 4e-79 seq6 127 3e-24 seq5 95.1 2e-14 >seq1 Length=4328376 Score = 309 bits (342), Expect = 4e-79 Identities = 483/688 (70%), Gaps = 6/688 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || || | ||||| || || ||||| Sbjct 1765624 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAAATACCC 1765683 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | |||||||| || ||||||||||||||||| || ||||| ||| Sbjct 1765684 TCCTCGATGGTGAGGAGAGAAACATCGAAGGTACCACCACCCAGGTCGAAGATGAGGACG 1765743 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || | ||||| ||||||||||| ||||| || || || || || || Sbjct 1765744 TTGCGCTCGCCCTCCTGCTTCTTGTCGAGACCGTAGGCGATGGCGGCAGCAGTGGGCTCG 1765803 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || || || ||| ||||| | || | || || || || || || || Sbjct 1765804 TTGATGATGCGGAGGACGTTGAGGCCCGAGATGAGACCGGCGTCCTTGGTGGCCTGGCGC 1765863 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| ||||| || ||||| || | ||| |||| |||| | ||| || Sbjct 1765864 TGAGAGTCGTTGAAGTACGCGGGGACGGTGATGACAGCGTTGTTGACGGTGCCACCAAGG 1765923 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || || | || ||| ||||| || ||||| || || ||||| |||| | Sbjct 1765924 TAAGACTCGGCAGTCTCACGCATCTTGGTCAGGACCATGGAGGAGATCTCCTCAGGAGTG 1765983 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| || || || || || | ||||| || || ||||| || |||| | | | Sbjct 1765984 AACTGCTTGGTCTCGCCCTTGTACTCAACCTCGATGATGGGCTT-GCCGC--CCTTGTCG 1766040 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 || | ||| | | | | ||||||||| | ||||||| ||| | ||||| | Sbjct 1766041 ATGATCTTGAAGGGGAAGTGCTTCATATCGGCCTGGACCTCGGCGTCGGCGAACTTGCGA 1766100 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| || ||||| || || || |||||||| | |||||||||||| |||||||| Sbjct 1766101 CCGATGAGGCGCTTGGCGTCGAAGACTGTGTTGTGGGGGTTCATGGCGACCTGGTTCTTG 1766160 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || ||||| ||||| || | | || || || |||||| |||| || || || Sbjct 1766161 GCGGCATCACCGATGAGACGCTC---AGTGTCGGTGAAGGCGACGAACGAGGGTGTTGTG 1766217 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || || |||||||| ||||| || || | |||||||| | |||||||||| ||| Sbjct 1766218 CGGTTACCCTGGTCGTTGGCAATGATCTCGATGCGGTCGTCACGGAAGACGCCGACACAC 1766277 Query 8117 GAATACGTTGTTCCTAAATCAATACCGA 8144 || || || || || || || ||||||| Sbjct 1766278 GAGTAGGTCGTGCCCAAGTCGATACCGA 1766305 Score = 127 bits (140), Expect = 3e-24 Identities = 227/328 (69%), Gaps = 5/328 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | ||| || || || || || || || || |||| ||| Sbjct 1549225 TCGAAATCCTCACCACCAAGGTGGGTGTCACCAGCAGTGGCCAGAACCTCGAAGACACCC 1549166 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | || |||||||| ||||||||||| || || | | || | | Sbjct 1549165 TCGTCAATGGACAGAAGGGACACATCAAAGGTACCACCACCGAGATCGTAGACGATGATG 1549106 Query 7577 TT-CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | ||| || || | | |||| || |||||||| || ||||| || || || || || Sbjct 1549105 TGGCGT-TCACCGCC---GGTCTTGTCAAGACCGTAGGCAATAGCGGCGGCGGTGGGCTC 1549050 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | || || || ||| ||||||||||| | ||||| || || || || || Sbjct 1549049 GTTGACGATGCGGAGGACGTTGAGGCCAGCAATGACACCGGCATCCTTGGTAGCCTGACG 1548990 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| |||||||| ||||| || ||||| |||| || || ||||| || | Sbjct 1548989 CTGGTTGTCGTTGAAGTAGGCAGGGACGGTGACGACGGCGTGGGTAACCTTCTTGCCCAA 1548930 Query 7756 ATACGATTCCGCGATATCTTTCATTTTG 7783 ||||| || |||| || ||||| ||| Sbjct 1548929 GTACGACTCGGCGACCTCCTTCATCTTG 1548902 >seq6 Length=1332594 Score = 127 bits (140), Expect = 3e-24 Identities = 241/354 (68%), Gaps = 3/354 (1%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || | |||||||||||| || || || || || || ||||| |||| ||| Sbjct 39298 ATCGAAGTCCTGACCACCCAAGTGAGTGTCACCGGCAGTAGCCTTGACGGTGAAGACACC 39357 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || | ||||| | | || ||||| || ||||||||||| || || | ||||| || Sbjct 39358 ACCCTGGATGTTGAGGAGGGAGACATCGAAAGTACCACCACCGAGATCGTAGATGAGGAC 39417 Query 7576 GTTCGTATCGTCGTCT---TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 ||| || | || ||| |||||||||| ||||| || || || || || Sbjct 39418 GTTGCGCTCCTTCTCGGACTTGCCGGCGCCGAGACCGTAGGCGATGGCGGCAGCGGTAGG 39477 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || || || || || ||| ||||||||||| | | || || || || || || Sbjct 39478 CTCGTTGATGATGCGGAGGACGTTGAGGCCAGCAATGGCACCGGCGTCCTTGGTAGCCTG 39537 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || || ||||| |||||||| ||||| || | ||| || | | || ||||| || Sbjct 39538 ACGCTGGTTGTCGTTGAAGTAGGCAGGGACGGTGATGACAGCCTTCTCAACCTTCTTGCC 39597 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 ||| | | || ||||| || ||||| ||| || ||||| | || ||||| Sbjct 39598 GAGCTTGGTCTCGGCGATCTCCTTCATCTTGACGAGGACCATGGCAGAGATCTC 39651 >seq5 Length=2741173 Score = 95.1 bits (104), Expect = 2e-14 Identities = 228/340 (67%), Gaps = 14/340 (4%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | ||| ||||| || ||| | ||||| || |||| ||| Sbjct 2388607 ATCGAAATCCTCACCACCAAGGTGGGTATCACCGTTGGTGGACTTGACCTCGAAGACACC 2388548 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT---GAG 7572 | || | | | || | ||| || ||||||||||| || || | | || Sbjct 2388547 CTGCTGGATCTCGAGGATGGAGATATCGAAGGTACCACCACCAAGATCGTAGACAGCGAC 2388488 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 ||| || ||| | || ||| |||||||||||||| | ||| || || || || Sbjct 2388487 GACG--CG-ATCAGCCTC------CTTCTCGAGACCGTACGCAAGAGCAGCAGCGGTAGG 2388437 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTT 7691 || || | | ||| || ||||| ||||| || | ||| || || || || || | Sbjct 2388436 CTCGTTGACGACACGGAGGACGTTCAAGCCAGAGAT-CTGGCCGGCGTCCTTGGTGGCCT 2388378 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 | || || || ||||| |||||||| || || || ||||| |||| | |||| ||| | Sbjct 2388377 GACGCTGAGAGTCGTTGAAGTAGGCGGGAACAGTGACGACGGCGTTCTTGACGGGCTTGC 2388318 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 ||||| | || ||| | || ||||| ||| | || || Sbjct 2388317 TCAGATAGGCCTCGGCGGTCTCCTTCATCTTGTTGAGGAC 2388278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131426525320