Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq1 309 4e-79
seq6 127 3e-24
seq5 95.1 2e-14
>seq1
Length=4328376
Score = 309 bits (342), Expect = 4e-79
Identities = 483/688 (70%), Gaps = 6/688 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || || || | ||||| || || |||||
Sbjct 1765624 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAAATACCC 1765683
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || ||| | | | |||||||| || ||||||||||||||||| || ||||| |||
Sbjct 1765684 TCCTCGATGGTGAGGAGAGAAACATCGAAGGTACCACCACCCAGGTCGAAGATGAGGACG 1765743
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || | ||||| ||||||||||| ||||| || || || || || ||
Sbjct 1765744 TTGCGCTCGCCCTCCTGCTTCTTGTCGAGACCGTAGGCGATGGCGGCAGCAGTGGGCTCG 1765803
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || || || || ||| ||||| | || | || || || || || || ||
Sbjct 1765804 TTGATGATGCGGAGGACGTTGAGGCCCGAGATGAGACCGGCGTCCTTGGTGGCCTGGCGC 1765863
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| || ||||| ||||| || ||||| || | ||| |||| |||| | ||| ||
Sbjct 1765864 TGAGAGTCGTTGAAGTACGCGGGGACGGTGATGACAGCGTTGTTGACGGTGCCACCAAGG 1765923
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| || || || | || ||| ||||| || ||||| || || ||||| |||| |
Sbjct 1765924 TAAGACTCGGCAGTCTCACGCATCTTGGTCAGGACCATGGAGGAGATCTCCTCAGGAGTG 1765983
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876
||||| || || || || || | ||||| || || ||||| || |||| | | |
Sbjct 1765984 AACTGCTTGGTCTCGCCCTTGTACTCAACCTCGATGATGGGCTT-GCCGC--CCTTGTCG 1766040
Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936
|| | ||| | | | | ||||||||| | ||||||| ||| | ||||| |
Sbjct 1766041 ATGATCTTGAAGGGGAAGTGCTTCATATCGGCCTGGACCTCGGCGTCGGCGAACTTGCGA 1766100
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
||||| || ||||| || || || |||||||| | |||||||||||| ||||||||
Sbjct 1766101 CCGATGAGGCGCTTGGCGTCGAAGACTGTGTTGTGGGGGTTCATGGCGACCTGGTTCTTG 1766160
Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056
|| || || ||||| ||||| || | | || || || |||||| |||| || || ||
Sbjct 1766161 GCGGCATCACCGATGAGACGCTC---AGTGTCGGTGAAGGCGACGAACGAGGGTGTTGTG 1766217
Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116
|| || || |||||||| ||||| || || | |||||||| | |||||||||| |||
Sbjct 1766218 CGGTTACCCTGGTCGTTGGCAATGATCTCGATGCGGTCGTCACGGAAGACGCCGACACAC 1766277
Query 8117 GAATACGTTGTTCCTAAATCAATACCGA 8144
|| || || || || || || |||||||
Sbjct 1766278 GAGTAGGTCGTGCCCAAGTCGATACCGA 1766305
Score = 127 bits (140), Expect = 3e-24
Identities = 227/328 (69%), Gaps = 5/328 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||| | ||| || || || || || || || || |||| |||
Sbjct 1549225 TCGAAATCCTCACCACCAAGGTGGGTGTCACCAGCAGTGGCCAGAACCTCGAAGACACCC 1549166
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | || |||||||| ||||||||||| || || | | || | |
Sbjct 1549165 TCGTCAATGGACAGAAGGGACACATCAAAGGTACCACCACCGAGATCGTAGACGATGATG 1549106
Query 7577 TT-CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
| ||| || || | | |||| || |||||||| || ||||| || || || || ||
Sbjct 1549105 TGGCGT-TCACCGCC---GGTCTTGTCAAGACCGTAGGCAATAGCGGCGGCGGTGGGCTC 1549050
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| | || || || ||| ||||||||||| | ||||| || || || || ||
Sbjct 1549049 GTTGACGATGCGGAGGACGTTGAGGCCAGCAATGACACCGGCATCCTTGGTAGCCTGACG 1548990
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| ||||| |||||||| ||||| || ||||| |||| || || ||||| || |
Sbjct 1548989 CTGGTTGTCGTTGAAGTAGGCAGGGACGGTGACGACGGCGTGGGTAACCTTCTTGCCCAA 1548930
Query 7756 ATACGATTCCGCGATATCTTTCATTTTG 7783
||||| || |||| || ||||| |||
Sbjct 1548929 GTACGACTCGGCGACCTCCTTCATCTTG 1548902
>seq6
Length=1332594
Score = 127 bits (140), Expect = 3e-24
Identities = 241/354 (68%), Gaps = 3/354 (1%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
|||||| || | |||||||||||| || || || || || || ||||| |||| |||
Sbjct 39298 ATCGAAGTCCTGACCACCCAAGTGAGTGTCACCGGCAGTAGCCTTGACGGTGAAGACACC 39357
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
|| | ||||| | | || ||||| || ||||||||||| || || | ||||| ||
Sbjct 39358 ACCCTGGATGTTGAGGAGGGAGACATCGAAAGTACCACCACCGAGATCGTAGATGAGGAC 39417
Query 7576 GTTCGTATCGTCGTCT---TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632
||| || | || ||| |||||||||| ||||| || || || || ||
Sbjct 39418 GTTGCGCTCCTTCTCGGACTTGCCGGCGCCGAGACCGTAGGCGATGGCGGCAGCGGTAGG 39477
Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692
|| || || || || || ||| ||||||||||| | | || || || || || ||
Sbjct 39478 CTCGTTGATGATGCGGAGGACGTTGAGGCCAGCAATGGCACCGGCGTCCTTGGTAGCCTG 39537
Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752
|| || ||||| |||||||| ||||| || | ||| || | | || ||||| ||
Sbjct 39538 ACGCTGGTTGTCGTTGAAGTAGGCAGGGACGGTGATGACAGCCTTCTCAACCTTCTTGCC 39597
Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806
||| | | || ||||| || ||||| ||| || ||||| | || |||||
Sbjct 39598 GAGCTTGGTCTCGGCGATCTCCTTCATCTTGACGAGGACCATGGCAGAGATCTC 39651
>seq5
Length=2741173
Score = 95.1 bits (104), Expect = 2e-14
Identities = 228/340 (67%), Gaps = 14/340 (4%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||| | ||| ||||| || ||| | ||||| || |||| |||
Sbjct 2388607 ATCGAAATCCTCACCACCAAGGTGGGTATCACCGTTGGTGGACTTGACCTCGAAGACACC 2388548
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT---GAG 7572
| || | | | || | ||| || ||||||||||| || || | | ||
Sbjct 2388547 CTGCTGGATCTCGAGGATGGAGATATCGAAGGTACCACCACCAAGATCGTAGACAGCGAC 2388488
Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632
||| || ||| | || ||| |||||||||||||| | ||| || || || ||
Sbjct 2388487 GACG--CG-ATCAGCCTC------CTTCTCGAGACCGTACGCAAGAGCAGCAGCGGTAGG 2388437
Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTT 7691
|| || | | ||| || ||||| ||||| || | ||| || || || || || |
Sbjct 2388436 CTCGTTGACGACACGGAGGACGTTCAAGCCAGAGAT-CTGGCCGGCGTCCTTGGTGGCCT 2388378
Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751
| || || || ||||| |||||||| || || || ||||| |||| | |||| ||| |
Sbjct 2388377 GACGCTGAGAGTCGTTGAAGTAGGCGGGAACAGTGACGACGGCGTTCTTGACGGGCTTGC 2388318
Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791
||||| | || ||| | || ||||| ||| | || ||
Sbjct 2388317 TCAGATAGGCCTCGGCGGTCTCCTTCATCTTGTTGAGGAC 2388278
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635131426525320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |