Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq22 280 2e-70 seq3 134 2e-26 seq4 84.2 3e-11 >seq22 Length=534521 Score = 280 bits (310), Expect = 2e-70 Identities = 912/1395 (65%), Gaps = 35/1395 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || | |||| ||||| || || || ||||| ||| Sbjct 116731 CCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCCACGGCGACGACATTGAGCGTGTC 116790 Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || ||||| | ||| |||| || || | || ||||| || Sbjct 116791 ATTGAGACTTACAACCTCATGTCAAGCAAGTAC-TTCACACATGCCTCTCCCACCCTGTT 116849 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||||||||| || | || | || || |||||| | | | ||||| || Sbjct 116850 CAACGCTGGTACTCCCCAGGCTCAGCTTTCGTCCTGCTTCCTTGTCGACATGAAGGATGA 116909 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 | || | ||||| || | |||||||| |||||| ||||| ||| |||||| Sbjct 116910 TAGCATTGACGGCATCTATGACACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGG 116969 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACA 111908 |||||| || || ||||||| || | || | | | ||| || || || || Sbjct 116970 TGGTATTGGTCTGAACATCCACCGCATCCGTGCTACC--GGCTCCTACATTGCCGGCACC 117027 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || ||| || | || ||| |||| ||||| || || || ||| ||| || | || Sbjct 117028 AACGGTACCTCCAACGGCATTGTTCCCATGCTGCGTGTCTTCAACAACACTGCCAGATAC 117087 Query 111969 GTAAACCAAGCTGGGCGTCG-CAAGGGATCTATCGCAGTC------TATCTTGAGCCATG 112021 || |||| ||||| | |||| || || ||| || || || ||||| || Sbjct 117088 GTCGACCA----GGGCGGCAACAAGAGACCTGGCGCTTTCGCCATTTACCTCGAGCCCTG 117143 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 |||||||||| || | |||||||| || | || ||||| || | |||||| || Sbjct 117144 GCACGCGGATGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGATCCG 117203 Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 ||| ||||||||| ||| ||||||||||| || || ||||||||| | || ||| | Sbjct 117204 TGCCCGTGATCTCTTCCTCGCCCTCTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAA 117263 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 || ||| | ||| ||||| | ||||| || || || || ||| |||||| || Sbjct 117264 GAACGGCGAGTGGACTCTCATGTGTCCCAACGAGTGCCCTGGCCTCGCCGATGTGTACGG 117323 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261 || ||||| || || || ||| |||||||||| || |||| | | || | | Sbjct 117324 CGACGAGTTCGAGGCTCTGTACGAGAAGTACGAGGCCGAGGGTCGTGGTCGTCAGAAGAT 117383 Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 | || | || | ||||| | || || ||| || |||| || ||||| |||| || | Sbjct 117384 -CAAGGCCCAGAAGCTGTGGTACGCCATCCTCGAGGCTCAGACTGAGACCGGTAACCCTT 117442 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||||| ||||| || || |||| ||||| || || ||||| ||||| ||| Sbjct 117443 TCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACTTGGGAACCATCC 117502 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 || ||||||||||| || || ||| | || | | | | |||||| ||||| | Sbjct 117503 GCAGCTCCAACCTCTGCACTGAGATCATCGAGTACTCTGCCCCCGATGAGGTCGCTGTCT 117562 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT--GA 112498 | || | || || | ||||| ||| ||| || || | | | || | | | | | || Sbjct 117563 GCAATTTGGCTTCCCTGGCTCTGCCCCAGTTCGTTGA-CTACA-ACGAGGCCGTCTACGA 117620 Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCA---CAAAAAACCTAAACAGAGTTAT 112555 | | || |||||||| ||||| ||||| ||||| |||| | || Sbjct 117621 CTTCCAGAAGCTCCACGACGTTAC---CCGTGTCATTGTTCGCAACCTGAACAAGATCAT 117677 Query 112556 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 112615 ||||| || | |||||||| || || || || || ||| | ||||| || || Sbjct 117678 TGATATCAACTACTACCCCGTGCAGGAGGCCCGCAACAGCAACATGCGCCACCGCCCCAT 117737 Query 112616 TGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTT-GAT 112673 ||||||||||| || |||||||| |||| ||| || || || || || || ||| || Sbjct 117738 CGGTCTCGGTGTTCAGGGTCTCGCCGATGCCTTCCTTGCTCTG-CG-CATGCCTTTCGAG 117795 Query 112674 TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTT 112733 || ||| || | | |||| || || || ||||| || || ||||| || ||| Sbjct 117796 TCTCCCGAGGCTAGACAGCTCAACAAGCAGATCTTCGAGACCATCTACCACGCTGCGCTT 117855 Query 112734 GAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCA 112793 || | ||||| || ||| |||| || || || | ||||| ||||| Sbjct 117856 ACTGCCTCTATGGAGTGCGCCAAGGAGCATGGCCCTTACTCCACTTACGAGGGCTCTCCT 117915 Query 112794 GCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA-GACCAAGCTTCACTACGA 112852 | || || || | || || | || |||| |||| || | ||| | || || || Sbjct 117916 GTCTCGCAGGGTATCCTCCAGTACGACATGT-GGAATGTCACCCCCACGGATCTCTGGGA 117974 Query 112853 CTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 112912 ||||| | |||||||| | ||||||||| | ||| | || |||||| | || | || Sbjct 117975 CTGGGCCAGCCTCAAGGAGCAGATCAAGGAGCATGGTGTCCGCAACAGTTTGCTGGTCGC 118034 Query 112913 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 112972 || ||||| || ||| ||| | || || | || || || || |||||||| || || Sbjct 118035 CCCCATGCCTACTGCCAGTACCTCCCAGATTCTCGGCAACAACGAGTGCTTTGAGCCTTA 118094 Query 112973 CACGACGAACATCTA 112987 ||| | |||||||| Sbjct 118095 CACCTCAAACATCTA 118109 >seq3 Length=3980562 Score = 134 bits (148), Expect = 2e-26 Identities = 156/209 (75%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 102126 AAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAG 102182 ||||| || || |||||| |||||||| | || |||| | |||| ||| || Sbjct 2739023 AAGAAGGCCGACTGGGCTCTGAAGTGGATCTCCGACCGGGAGTC---TACCTTCGCTCAG 2739079 Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 102242 || ||| | || ||||| || ||||||||||||||| ||| ||||| | | || Sbjct 2739080 CGCCTCATTGCCTTTGCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATC 2739139 Query 102243 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 102302 | |||||||||||||| || |||||||| || ||| ||||||||||||||| ||||| Sbjct 2739140 TTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCG 2739199 Query 102303 CGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||||||||| |||||| || ||||| Sbjct 2739200 CGTGACGAGGGCCTCCACACTGACTTTGC 2739228 >seq4 Length=3265764 Score = 84.2 bits (92), Expect = 3e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124 || |||||||| || ||||||| ||||| || | | | ||| || | ||||| Sbjct 589263 GCGTCAATCTCGTCGATGAAGATAATGCACGGCGCACTCTTGCGCGCATTGGCGAAGAGG 589204 Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 16183 || || || || ||| || ||||| ||||||||||| || || | | | || || Sbjct 589203 TCACGCACTCGGGAGGCACCGACACCGACAAACATCTCTACGAACTCGGAGCCGCTGACG 589144 Query 16184 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243 || | ||||||||| ||| ||||| || | || ||| || | ||||||||| || Sbjct 589143 CTGAA-GAAGGGGACGCCAGACTCACCGGCGGTAGCCTTGGCAAGCATAGTCTTACCAGT 589085 Query 16244 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 ||| || || ||||| | ||| || || || ||||||||||| Sbjct 589084 ACCGGGTGGTCCAGCGAGAATGGCGCCGCGGGGGATCTTGGCGCC 589040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741057644560