Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq22 280 2e-70
seq3 134 2e-26
seq4 84.2 3e-11
>seq22
Length=534521
Score = 280 bits (310), Expect = 2e-70
Identities = 912/1395 (65%), Gaps = 35/1395 (3%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| ||||||| || | |||| ||||| || || || ||||| |||
Sbjct 116731 CCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCCACGGCGACGACATTGAGCGTGTC 116790
Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730
| ||||| ||| || ||||| | ||| |||| || || | || ||||| ||
Sbjct 116791 ATTGAGACTTACAACCTCATGTCAAGCAAGTAC-TTCACACATGCCTCTCCCACCCTGTT 116849
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
|||||||||||| || | || | || || |||||| | | | ||||| ||
Sbjct 116850 CAACGCTGGTACTCCCCAGGCTCAGCTTTCGTCCTGCTTCCTTGTCGACATGAAGGATGA 116909
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
| || | ||||| || | |||||||| |||||| ||||| ||| ||||||
Sbjct 116910 TAGCATTGACGGCATCTATGACACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGG 116969
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACA 111908
|||||| || || ||||||| || | || | | | ||| || || || ||
Sbjct 116970 TGGTATTGGTCTGAACATCCACCGCATCCGTGCTACC--GGCTCCTACATTGCCGGCACC 117027
Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968
|| ||| || | || ||| |||| ||||| || || || ||| ||| || | ||
Sbjct 117028 AACGGTACCTCCAACGGCATTGTTCCCATGCTGCGTGTCTTCAACAACACTGCCAGATAC 117087
Query 111969 GTAAACCAAGCTGGGCGTCG-CAAGGGATCTATCGCAGTC------TATCTTGAGCCATG 112021
|| |||| ||||| | |||| || || ||| || || || ||||| ||
Sbjct 117088 GTCGACCA----GGGCGGCAACAAGAGACCTGGCGCTTTCGCCATTTACCTCGAGCCCTG 117143
Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081
|||||||||| || | |||||||| || | || ||||| || | |||||| ||
Sbjct 117144 GCACGCGGATGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGATCCG 117203
Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141
||| ||||||||| ||| ||||||||||| || || ||||||||| | || ||| |
Sbjct 117204 TGCCCGTGATCTCTTCCTCGCCCTCTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAA 117263
Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201
|| ||| | ||| ||||| | ||||| || || || || ||| |||||| ||
Sbjct 117264 GAACGGCGAGTGGACTCTCATGTGTCCCAACGAGTGCCCTGGCCTCGCCGATGTGTACGG 117323
Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261
|| ||||| || || || ||| |||||||||| || |||| | | || | |
Sbjct 117324 CGACGAGTTCGAGGCTCTGTACGAGAAGTACGAGGCCGAGGGTCGTGGTCGTCAGAAGAT 117383
Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320
| || | || | ||||| | || || ||| || |||| || ||||| |||| || |
Sbjct 117384 -CAAGGCCCAGAAGCTGTGGTACGCCATCCTCGAGGCTCAGACTGAGACCGGTAACCCTT 117442
Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380
||||| ||||| || || |||| ||||| || || ||||| ||||| |||
Sbjct 117443 TCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACTTGGGAACCATCC 117502
Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440
|| ||||||||||| || || ||| | || | | | | |||||| ||||| |
Sbjct 117503 GCAGCTCCAACCTCTGCACTGAGATCATCGAGTACTCTGCCCCCGATGAGGTCGCTGTCT 117562
Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT--GA 112498
| || | || || | ||||| ||| ||| || || | | | || | | | | | ||
Sbjct 117563 GCAATTTGGCTTCCCTGGCTCTGCCCCAGTTCGTTGA-CTACA-ACGAGGCCGTCTACGA 117620
Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCA---CAAAAAACCTAAACAGAGTTAT 112555
| | || |||||||| ||||| ||||| ||||| |||| | ||
Sbjct 117621 CTTCCAGAAGCTCCACGACGTTAC---CCGTGTCATTGTTCGCAACCTGAACAAGATCAT 117677
Query 112556 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 112615
||||| || | |||||||| || || || || || ||| | ||||| || ||
Sbjct 117678 TGATATCAACTACTACCCCGTGCAGGAGGCCCGCAACAGCAACATGCGCCACCGCCCCAT 117737
Query 112616 TGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTT-GAT 112673
||||||||||| || |||||||| |||| ||| || || || || || || ||| ||
Sbjct 117738 CGGTCTCGGTGTTCAGGGTCTCGCCGATGCCTTCCTTGCTCTG-CG-CATGCCTTTCGAG 117795
Query 112674 TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTT 112733
|| ||| || | | |||| || || || ||||| || || ||||| || |||
Sbjct 117796 TCTCCCGAGGCTAGACAGCTCAACAAGCAGATCTTCGAGACCATCTACCACGCTGCGCTT 117855
Query 112734 GAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCA 112793
|| | ||||| || ||| |||| || || || | ||||| |||||
Sbjct 117856 ACTGCCTCTATGGAGTGCGCCAAGGAGCATGGCCCTTACTCCACTTACGAGGGCTCTCCT 117915
Query 112794 GCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA-GACCAAGCTTCACTACGA 112852
| || || || | || || | || |||| |||| || | ||| | || || ||
Sbjct 117916 GTCTCGCAGGGTATCCTCCAGTACGACATGT-GGAATGTCACCCCCACGGATCTCTGGGA 117974
Query 112853 CTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 112912
||||| | |||||||| | ||||||||| | ||| | || |||||| | || | ||
Sbjct 117975 CTGGGCCAGCCTCAAGGAGCAGATCAAGGAGCATGGTGTCCGCAACAGTTTGCTGGTCGC 118034
Query 112913 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 112972
|| ||||| || ||| ||| | || || | || || || || |||||||| || ||
Sbjct 118035 CCCCATGCCTACTGCCAGTACCTCCCAGATTCTCGGCAACAACGAGTGCTTTGAGCCTTA 118094
Query 112973 CACGACGAACATCTA 112987
||| | ||||||||
Sbjct 118095 CACCTCAAACATCTA 118109
>seq3
Length=3980562
Score = 134 bits (148), Expect = 2e-26
Identities = 156/209 (75%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 102126 AAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAG 102182
||||| || || |||||| |||||||| | || |||| | |||| ||| ||
Sbjct 2739023 AAGAAGGCCGACTGGGCTCTGAAGTGGATCTCCGACCGGGAGTC---TACCTTCGCTCAG 2739079
Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 102242
|| ||| | || ||||| || ||||||||||||||| ||| ||||| | | ||
Sbjct 2739080 CGCCTCATTGCCTTTGCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATC 2739139
Query 102243 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 102302
| |||||||||||||| || |||||||| || ||| ||||||||||||||| |||||
Sbjct 2739140 TTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCG 2739199
Query 102303 CGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||||||||| |||||| || |||||
Sbjct 2739200 CGTGACGAGGGCCTCCACACTGACTTTGC 2739228
>seq4
Length=3265764
Score = 84.2 bits (92), Expect = 3e-11
Identities = 155/225 (69%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124
|| |||||||| || ||||||| ||||| || | | | ||| || | |||||
Sbjct 589263 GCGTCAATCTCGTCGATGAAGATAATGCACGGCGCACTCTTGCGCGCATTGGCGAAGAGG 589204
Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 16183
|| || || || ||| || ||||| ||||||||||| || || | | | || ||
Sbjct 589203 TCACGCACTCGGGAGGCACCGACACCGACAAACATCTCTACGAACTCGGAGCCGCTGACG 589144
Query 16184 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243
|| | ||||||||| ||| ||||| || | || ||| || | ||||||||| ||
Sbjct 589143 CTGAA-GAAGGGGACGCCAGACTCACCGGCGGTAGCCTTGGCAAGCATAGTCTTACCAGT 589085
Query 16244 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
||| || || ||||| | ||| || || || |||||||||||
Sbjct 589084 ACCGGGTGGTCCAGCGAGAATGGCGCCGCGGGGGATCTTGGCGCC 589040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741057644560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |