Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq22 181 1e-40 seq4 159 4e-34 >seq22 Length=534521 Score = 181 bits (200), Expect = 1e-40 Identities = 1065/1690 (63%), Gaps = 51/1690 (3%) Strand=Plus/Minus Query 109376 TAAATTGGATTGGTCGAGCTTTCGCCTTCGAGCGAAGATAATACATACCCGTTTTGAGAC 109435 |||| ||||| || |||| |||| | ||||| || ||||| || || ||||||| Sbjct 118486 TAAACTGGATAGGCTGAGCAGCAGCCTGGGTACGAAGGTAGTACATGCCGGTCTTGAGAC 118427 Query 109436 CAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAA 109495 | |||||| | | ||||| | || ||| | ||| || || ||| Sbjct 118426 CGAGCTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATTGTGGGGTCCTTCATGT 118367 Query 109496 ACAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGA 109555 | ||||| ||||| |||||||| || || ||| || || || ||||| | | || Sbjct 118366 GGATGTTCAGAGACTGGGACTGATCAATAAAAGCACCGCGGTCGGCAGCCATTTGCACGA 118307 Query 109556 TACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGT 109615 | | || || |||||||| |||||||| | | ||||| ||| |||| |||| Sbjct 118306 CTGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGAGCCTTGACATCGGCGGGGATGT 118247 Query 109616 CCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTC-GAC 109674 |||||| |||| ||| || || | | ||| | | |||||| || || ||| Sbjct 118246 TGGGGATGTTCTGAACAGAACCGCCCTCGGCAATGATGCGGTTCTTCATG-CTGTCAGAC 118188 Query 109675 CAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTT---GTTGACCACGACAAATTCA 109731 |||||||| | | | || | ||| || || |||||| || || ||| Sbjct 118187 CAGAGACCCA---TGTCGACAAGGTCCTTGAGGAGCCAAGGGTTGACGACCTGGAAGTCA 118131 Query 109732 CCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTG 109791 || || || || || ||||||||| | ||||| || || || ||||| |||||| Sbjct 118130 CCTGCGAGCACACGACGCGAGTAGATGTTTGAGGTGTAAGGCTCAAAGCACTCGTTGTTG 118071 Query 109792 CCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGA 109851 || || || || | || || || |||||||| || | || | |||||| |||| | Sbjct 118070 CCGAGAATCTGGGAGGTACTGGCAGTAGGCATGGGGGCGACCAGCAAACTGTTGCGGACA 118011 Query 109852 CCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTC 109911 || | | ||| | | |||| | | |||| || | || | | | Sbjct 118010 CCATGCTCCTTGATCTGCTCCTTGAGGCTGGCCCAGTCCCAGAGATCCGTGG-----GGG 117956 Query 109912 TCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTC 109971 | || || |||||| || || || | ||||| | ||||||| |||| | || | Sbjct 117955 TGAC-ATTCCACATGTCGTACTGGAGGATACCCTGCGAGACAGGAGAGCCCTCGTAAGTG 117897 Query 109972 TCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATA 110031 ||| | || | ||| ||| |||| || || || || || || || || Sbjct 117896 GAGTAAGGGCCATGCTCCTTGGCGCACTCCATAGAGGCAGTAAGCGCAGCGTGGTAGATG 117837 Query 110032 GTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAA 110091 ||||| || || || || | | | || ||| | | ||||| || | | || Sbjct 117836 GTCTCGAAGATCTGCTTGTTGAGCTGTCTAGCCTCGGGAGACTCGAAAGGCATGCG-CAG 117778 Query 110092 AG-AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTT 110150 || || || |||| || |||||||||||||||||||| |||||||| || |||||| Sbjct 117777 AGCAAGGAAGGCATCGGCGAGACCCTGAACACCGAGACCGATGGGGCGGTGGCGCATGTT 117718 Query 110151 AGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATT--- 110207 | || || | |||||||| ||||| || |||| | || || || Sbjct 117717 GCTGTTGCGGGCCTCCTGCACGGGGTAGTAGTTGATATCAATGATCTTGTTCAGGTTGCG 117658 Query 110208 --CTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAA--CGTTTTCGTCT 110263 | | ||| | || | || ||||| || | | | ||| | || | || Sbjct 117657 AACAATGACACGG-----GTAACGTCGTGGAGCTTCTGGAAGTCGTAGACG-----GCCT 117608 Query 110264 CCTTATTGACAT---ATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGT 110320 | || | | || | | ||| ||||| | || || | |||||| |||| ||| | Sbjct 117607 CGTTGTAGTCAACGAACTGGGGCAGAGCCAGGGAAGCCAAATTGCAGACAGCGACCTCAT 117548 Query 110321 CTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGT 110380 | | | | ||| || | || || || || | |||||| || ||| ||||||| Sbjct 117547 CGGGGGCAGAGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAAGT 117488 Query 110381 TCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTT 110440 ||||||| || ||| |||| |||||||| ||||||||| | ||| |||| || | Sbjct 117487 TCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATGAAAGGGTTACCGGTCT 117428 Query 110441 CCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTG-CGTTAGC 110498 | ||||| | || ||| ||||| | ||| | | || | | | | | || || | | Sbjct 117427 CAGTCTGAGCCTCGAGGATGGCGTACCACAGCTTCTGGGCCTTGATCTTCTGACG--ACC 117370 Query 110499 GAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGA 110558 |||| || |||||||||| ||||| |||| || || | ||||||||||| | Sbjct 117369 ACGACCCTCGGCCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCGCCGTACACATCGGC 117310 Query 110559 AAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTT 110618 || || || || |||||| | ||| | ||| | || || ||| || | ||| Sbjct 117309 GAGGCCAGGGCACTCGTTGGGACACATGAGAGTCCACTCGCCGTTCTTCTCGACACGCTT 117250 Query 110619 CATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATC 110678 |||||||||||| |||||||| | || ||| || |||||| ||| ||| || | Sbjct 117249 CATGAACAGGTCGGGAATCCAGAGGGCGAGGAAGAGATCACGGGCACGGATCTCCTCCTT 117190 Query 110679 ACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATA 110738 || ||||| ||| || || | || || | || ||||| |||||| || ||||| || Sbjct 117189 GCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACATCCGCGTGCCAGGGCTCGAGGTA 117130 Query 110739 ------GACAGCGATGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGC 110792 || |||| | || ||| | | || |||||| || || | || ||| Sbjct 117129 AATGGCGAAAGCGCCAGGTCTCTT--GTTG-CCGCCCTGGTCGACGTATCTGGCAGTGTT 117073 Query 110793 ATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCT 110852 |||||||| | ||||| |||| ||| || | ||| ||| || || || ||| Sbjct 117072 GTTGAAGACACGCAGCATGGGAACAATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTA 117013 Query 110853 GGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAAT 110912 ||| | ||||| ||| |||||| | || |||||||||||| ||| ||| || Sbjct 117012 GGAGCCGGTAGCACGGATGCGGTGGATGTTCAGACCAATACCACCAGCCATCTTGGAGAT 116953 Query 110913 TTGTGCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAA 110971 ||||| ||| |||| || |||| || || ||||| ||| |||| || | | Sbjct 116952 CATGGCACAGGTCT-TGAGAGTGTCATAGATGCCGTCAATGCTATCATCCTTCATGTCGA 116894 Query 110972 TTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCG 111031 || ||||| || || | ||||| | || || || || ||||| || || || | | Sbjct 116893 CAAGGAAGCAGGACGAAAGCTGAGCCTGGGGAGTACCAGCGTTGAACAGGGTGGGAGAGG 116834 Query 111032 CATGAATGAA 111041 |||| |||| Sbjct 116833 CATGTGTGAA 116824 >seq4 Length=3265764 Score = 159 bits (176), Expect = 4e-34 Identities = 346/508 (68%), Gaps = 20/508 (4%) Strand=Plus/Minus Query 11502 ACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGC 11561 ||||||||| || || || || | || || | || ||||| || || | ||| ||| | Sbjct 589450 ACGATCGAAGCGGCCCGGACGCATGAGCGCCTTGTCGAGAATGTCCACTCTGTTGGTACC 589391 Query 11562 GGCAATGACTACAATGCCAG-TCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | || |||| || | || | ||| ||| |||||||| |||||||| | ||| Sbjct 589390 CGCCAGTACGACAA--CCTGCTCGGACGTGTTGAAGCCGTCCATCTCTGTGAGGATCTGA 589333 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAG--GGCATACCACCTGCC----GAACGCTTC 11673 |||| ||| || ||||| |||| | | | || | |||| | ||| | Sbjct 589332 TTGAGGGTCGCCTCCCGCTCGTCGTGGCCGCCGCCAATGTTCTTGCCTTCAGCACGGGCC 589273 Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 || || | |||||||||||| |||||||| | || ||||| | || || | Sbjct 589272 TTGCCAATAGCGTCAATCTCGTCGATGAAGATAATGCACGGCGCACTCTTGCGCGCATTG 589213 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCG 11793 |||| || ||||| || || || || ||||| || |||||||| ||||| | | | Sbjct 589212 GCGAAGAGGTCACGCACTCGGGAGGCACCGACACCGACAAACATCTCTACGAACTCGGAG 589153 Query 11794 --GCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 || || | ||||| |||||| || ||||||||| ||| | || || || | || Sbjct 589152 CCGCTGA-CGCTGAA-GAAGGGGACGCCAGACTCACCGGCGGTAGCCTTGGCAAGCATAG 589095 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC---AC 11908 ||||||| ||||| |||| |||||||||| |||||| |||||||||||||| || || Sbjct 589094 TCTTACCAGTACCGGGTGGTCCAGCGAGAATGGCGCCGCGGGGGATCTTGGCGCCCAGAC 589035 Query 11909 TTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGG 11968 |||| | ||| ||||||||||| ||| |||| |||| | |||| ||||| Sbjct 589034 GGACAAACT---TCTCGGGCTTCTTGAGAAAGCTGACAAACTCCATGATCTCCTGCTTGG 588978 Query 11969 CGGAGTCGATACCCTCAACATCGGTGAA 11996 | || ||||| ||||||| | ||| Sbjct 588977 CCTCATCCATACCGGCAACATCAGAGAA 588950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974726339400