Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq22 239 5e-58 seq3 96.9 4e-15 seq4 86.0 7e-12 >seq22 Length=534521 Score = 239 bits (264), Expect = 5e-58 Identities = 572/854 (67%), Gaps = 21/854 (2%) Strand=Plus/Minus Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528 || ||||||||||| ||||| |||||| | | |||||| | || || || || Sbjct 117575 GAAGCCAAATTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATGATCTCAGTGCAG 117516 Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588 | |||||| || || || ||||| ||||| ||||| ||||| |||| |||||| Sbjct 117515 AGGTTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCC 117456 Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-C 106647 |||||||||||| | || | || ||||| ||||| | || ||| || || | ||||| | Sbjct 117455 TTGTAGAGCATGAAAGGGTTACCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCACAGC 117396 Query 106648 ATCGGCGGCTGGTACAA-TGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGG 106706 || | | || | | || || | || ||||| ||||||||||| ||| || | Sbjct 117395 TTCTGGGCCTTGATCTTCTGACGAC--CACGACCCTCGGCCTCGTACTTCTCGTACAGAG 117338 Query 106707 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAG 106766 | || ||||| || || | | |||| ||| || || || || ||||| | |||| Sbjct 117337 CCTCGAACTCGTCGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAG 117278 Query 106767 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 106826 ||| | || || ||| || ||||||||||| ||||| |||||||| |||| | Sbjct 117277 TCCACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGA 117218 Query 106827 AGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 106885 ||||||| | ||| || | || || | || ||||| || | || |||||||| Sbjct 117217 AGAGATCACGGGCACGGATC-TCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCA 117159 Query 106886 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC------CTT-TCGACG 106938 | || |||||||||||| ||||| || || | |||| || || ||| | | || Sbjct 117158 AAGACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCCG 117099 Query 106939 CCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 106998 ||| | | || | || | || ||| ||| || || || ||||| |||| ||| || Sbjct 117098 CCCTGGTCGA----CGTATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCC 117043 Query 106999 ATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTG 107058 | || ||| || || || ||| || | || | | ||||||| Sbjct 117042 GTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCGGTAGCACGGATGCGGTGGATGTT 116983 Query 107059 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 107118 || |||||||| |||||| ||| ||||| ||||| | | ||||| ||||||| Sbjct 116982 CAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGAT 116923 Query 107119 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 107178 |||| || || ||||| || ||| ||||||||| || | ||| | || Sbjct 116922 GCCGTCAATGCTATCATCCTTCATGTCGACAAGGAAGCAGGACGAAAGCTGAGCCTGGGG 116863 Query 107179 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTG 107236 |||||||| ||||| ||||| || | || || |||| ||| ||| ||||| | Sbjct 116862 AGTACCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAAG-TAC-TTGCTTGACATGAGG 116805 Query 107237 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATA 107296 | ||| ||||| | |||| |||||||| || ||||||||||||| | ||||||||| Sbjct 116804 TTGTAAGTCTCAATGACACGCTCAATGTCGTCGCCGTGGATGCCGACAGACACACGCATG 116745 Query 107297 AACATGTATTGGGG 107310 | ||||| ||||| Sbjct 116744 ATCATGTGCTGGGG 116731 >seq3 Length=3980562 Score = 96.9 bits (106), Expect = 4e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || |||||| ||||| || || || || || || || |||||| ||||| Sbjct 2739229 GGCAAAGTCAGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGGCC 2739170 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 |||||||| || |||||||| | ||| | || | | ||| | ||| ||||||||| Sbjct 2739169 GGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGAT 2739110 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 |||||| || ||||| |||| ||||||| ||||||| Sbjct 2739109 ACCCTCGACCGCAGCAAAGGCAATGAGGCGCTGAGCGAAGG 2739069 >seq4 Length=3265764 Score = 86.0 bits (94), Expect = 7e-12 Identities = 178/261 (68%), Gaps = 8/261 (3%) Strand=Plus/Minus Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431 || |||||||| || ||||||| ||| || || | | | ||| || | | ||||| Sbjct 589263 GCGTCAATCTCGTCGATGAAGATAATGCACGGCGCACTCTTGCGCGCATTGGCGAAGAGG 589204 Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 9490 || || || | ||| || ||||| ||||||||||| || || | | | || || Sbjct 589203 TCACGCACTCGGGAGGCACCGACACCGACAAACATCTCTACGAACTCGGAGCCGCTGACG 589144 Query 9491 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9550 || | ||||||||| ||| ||||| || | || ||| || | ||||||||| || Sbjct 589143 CTGAA-GAAGGGGACGCCAGACTCACCGGCGGTAGCCTTGGCAAGCATAGTCTTACCAGT 589085 Query 9551 ACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC---ACTTCCAAAGTA 9607 ||| || || ||||| | ||| || || || ||||||||||| || |||| | Sbjct 589084 ACCGGGTGGTCCAGCGAGAATGGCGCCGCGGGGGATCTTGGCGCCCAGACGGACAAACT- 589026 Query 9608 TCTCTCAGGTTGCTTGAGAAA 9628 |||| || | ||||||||| Sbjct 589025 --TCTCGGGCTTCTTGAGAAA 589007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979524166520