Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq22 239 5e-58
seq3 96.9 4e-15
seq4 86.0 7e-12
>seq22
Length=534521
Score = 239 bits (264), Expect = 5e-58
Identities = 572/854 (67%), Gaps = 21/854 (2%)
Strand=Plus/Minus
Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528
|| ||||||||||| ||||| |||||| | | |||||| | || || || ||
Sbjct 117575 GAAGCCAAATTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATGATCTCAGTGCAG 117516
Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588
| |||||| || || || ||||| ||||| ||||| ||||| |||| ||||||
Sbjct 117515 AGGTTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCC 117456
Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-C 106647
|||||||||||| | || | || ||||| ||||| | || ||| || || | ||||| |
Sbjct 117455 TTGTAGAGCATGAAAGGGTTACCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCACAGC 117396
Query 106648 ATCGGCGGCTGGTACAA-TGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGG 106706
|| | | || | | || || | || ||||| ||||||||||| ||| || |
Sbjct 117395 TTCTGGGCCTTGATCTTCTGACGAC--CACGACCCTCGGCCTCGTACTTCTCGTACAGAG 117338
Query 106707 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAG 106766
| || ||||| || || | | |||| ||| || || || || ||||| | ||||
Sbjct 117337 CCTCGAACTCGTCGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAG 117278
Query 106767 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 106826
||| | || || ||| || ||||||||||| ||||| |||||||| |||| |
Sbjct 117277 TCCACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGA 117218
Query 106827 AGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 106885
||||||| | ||| || | || || | || ||||| || | || ||||||||
Sbjct 117217 AGAGATCACGGGCACGGATC-TCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCA 117159
Query 106886 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC------CTT-TCGACG 106938
| || |||||||||||| ||||| || || | |||| || || ||| | | ||
Sbjct 117158 AAGACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCCG 117099
Query 106939 CCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 106998
||| | | || | || | || ||| ||| || || || ||||| |||| ||| ||
Sbjct 117098 CCCTGGTCGA----CGTATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCC 117043
Query 106999 ATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTG 107058
| || ||| || || || ||| || | || | | |||||||
Sbjct 117042 GTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCGGTAGCACGGATGCGGTGGATGTT 116983
Query 107059 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 107118
|| |||||||| |||||| ||| ||||| ||||| | | ||||| |||||||
Sbjct 116982 CAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGAT 116923
Query 107119 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 107178
|||| || || ||||| || ||| ||||||||| || | ||| | ||
Sbjct 116922 GCCGTCAATGCTATCATCCTTCATGTCGACAAGGAAGCAGGACGAAAGCTGAGCCTGGGG 116863
Query 107179 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTG 107236
|||||||| ||||| ||||| || | || || |||| ||| ||| ||||| |
Sbjct 116862 AGTACCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAAG-TAC-TTGCTTGACATGAGG 116805
Query 107237 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATA 107296
| ||| ||||| | |||| |||||||| || ||||||||||||| | |||||||||
Sbjct 116804 TTGTAAGTCTCAATGACACGCTCAATGTCGTCGCCGTGGATGCCGACAGACACACGCATG 116745
Query 107297 AACATGTATTGGGG 107310
| ||||| |||||
Sbjct 116744 ATCATGTGCTGGGG 116731
>seq3
Length=3980562
Score = 96.9 bits (106), Expect = 4e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332
|||||| || |||||| ||||| || || || || || || || |||||| |||||
Sbjct 2739229 GGCAAAGTCAGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGGCC 2739170
Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392
|||||||| || |||||||| | ||| | || | | ||| | ||| |||||||||
Sbjct 2739169 GGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGAT 2739110
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433
|||||| || ||||| |||| ||||||| |||||||
Sbjct 2739109 ACCCTCGACCGCAGCAAAGGCAATGAGGCGCTGAGCGAAGG 2739069
>seq4
Length=3265764
Score = 86.0 bits (94), Expect = 7e-12
Identities = 178/261 (68%), Gaps = 8/261 (3%)
Strand=Plus/Minus
Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431
|| |||||||| || ||||||| ||| || || | | | ||| || | | |||||
Sbjct 589263 GCGTCAATCTCGTCGATGAAGATAATGCACGGCGCACTCTTGCGCGCATTGGCGAAGAGG 589204
Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 9490
|| || || | ||| || ||||| ||||||||||| || || | | | || ||
Sbjct 589203 TCACGCACTCGGGAGGCACCGACACCGACAAACATCTCTACGAACTCGGAGCCGCTGACG 589144
Query 9491 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9550
|| | ||||||||| ||| ||||| || | || ||| || | ||||||||| ||
Sbjct 589143 CTGAA-GAAGGGGACGCCAGACTCACCGGCGGTAGCCTTGGCAAGCATAGTCTTACCAGT 589085
Query 9551 ACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC---ACTTCCAAAGTA 9607
||| || || ||||| | ||| || || || ||||||||||| || |||| |
Sbjct 589084 ACCGGGTGGTCCAGCGAGAATGGCGCCGCGGGGGATCTTGGCGCCCAGACGGACAAACT- 589026
Query 9608 TCTCTCAGGTTGCTTGAGAAA 9628
|||| || | |||||||||
Sbjct 589025 --TCTCGGGCTTCTTGAGAAA 589007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979524166520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |