Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq25 147 5e-30 seq9 141 2e-28 seq22 84.2 5e-11 >seq25 Length=380168 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| | || ||||| || || || ||||| ||| ||||| | |||||||| Sbjct 212392 ACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCC 212333 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || |||||||| || || || || || || ||||| || ||||| ||| Sbjct 212332 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGA 212273 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| |||||||||||||| ||| ||||| ||||| | ||||| Sbjct 212272 ATCTTGGACTTGACGTTGTCAATGGTGTCCGACGATTCAACTTCCAGGGTGATGGTCTTG 212213 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || || || | |||||| Sbjct 212212 CCAGTAAGAGTCTTGACAAAAATTTGCAT 212184 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| || || || ||||| |||| || ||||| || || ||| Sbjct 211708 ACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTTCTTCCGTCCTCG 211649 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || || || ||||| || || || ||||| || Sbjct 211648 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGG 211589 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||||||||| || || ||||| || | ||||| Sbjct 211588 ATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTG 211529 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 211528 CCCGTCAGGGTCTTGACGAAGATCTGCAT 211500 Score = 122 bits (134), Expect = 2e-22 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990 || || || ||||| ||||| || || || ||||| || | |||| || | ||||| || Sbjct 211936 ACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAAG-GTACGGCCATCCTC 211878 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || || ||||| || || || || || ||||| || || || ||||| || Sbjct 211877 GAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTG 211818 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| || ||||| || || || || ||||| |||| ||||| Sbjct 211817 GATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCGACCTCAAGAGTAATGGTCTT 211758 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || ||||| || || ||||| | |||||| Sbjct 211757 GCCGGTCAAGGTCTTGACGAAGATCTGCATT 211727 >seq9 Length=1091098 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||| || ||||| || || ||||| || || || ||||| || | ||||| | Sbjct 140789 AGTCTCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGG 140730 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| ||||||||||| || |||||||| || || || ||||| || |||||||| || Sbjct 140729 CCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCC 140670 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || || || ||||||||| || || ||||| || ||||| || ||||| Sbjct 140669 TTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGACGACTCCACCTCGAGGGTG 140610 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || |||| || || ||||| | ||||| Sbjct 140609 ATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 140572 >seq22 Length=534521 Score = 84.2 bits (92), Expect = 5e-11 Identities = 186/278 (67%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 160594 CGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGGAGCCT 160653 |||| |||||| | |||| || ||||||||| | || | | || || || |||| || Sbjct 117222 CGCCCTCTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAAGAACGGCGAGTGGACTCT 117281 Query 160654 TTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAGACTCT 160713 | |||||||| || ||||| || | ||||| || || |||||||||| |||| Sbjct 117282 CATGTGTCCCAACGAGTGCCCTGGCCTCGCCGATGTGTACGGCGACGAGTTCGAGGCTCT 117341 Query 160714 TTATGAAAGATACGAAAAAGAGGGAAGAGCCA---AAAAGGTCGTGAAGGCCCAAGAACT 160770 || || | ||||| ||||| | | | ||| || |||||||| | || Sbjct 117342 GTACGAGAAGTACGAGGCCGAGGGTCGTGGTCGTCAGAAGATC---AAGGCCCAGAAGCT 117398 Query 160771 GTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAGGA 160830 |||| | |||||| | || || ||| |||| || || || |||||||| Sbjct 117399 GTGGTACGCCATCCTCGAGGCTCAGACTGAGACCGGTAACCCTTTCATGCTCTACAAGGA 117458 Query 160831 TGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGGAA 160868 ||| | |||||||| |||||||||||||| |||| Sbjct 117459 TGCTGCCAACCGCAAGAGCAACCAGAAGAACTTGGGAA 117496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479140764691