Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq9 96.9 2e-15 seq25 82.4 5e-11 >seq9 Length=1091098 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| || | || |||| || ||||| || ||||| || Sbjct 140762 TCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAG 140703 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 140702 ATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 140643 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| ||| || || || ||||| || |||||||| Sbjct 140642 TCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACG 140583 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 140582 AAGATCTGCAT 140572 >seq25 Length=380168 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| ||| | || |||| |||| ||| || || || || Sbjct 212146 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAG 212087 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || || || Sbjct 212086 ATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTCAC--AT 212029 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 ||||||| || | ||| || || | || ||||| ||||| ||||||||||| Sbjct 212028 --TATCGATGGTGTCGGAAGACTCCACCTCCAGAGTGATGGTCTTTCCAGTGAGAGTCTT 211971 Query 34967 CACAAAGATCTGCATA 34982 || |||||||||||| Sbjct 211970 GACGAAGATCTGCATA 211955 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| || | || |||| ||| Sbjct 212392 ACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCC 212333 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || || ||||| || | || | ||||||||||| | Sbjct 212332 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGA 212273 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | ||||| || | ||| ||||| || Sbjct 212272 ATCTTGGACTTGACGTTGTCAATGGTGTCCGACGATTCAACTTCCAGGGTGATGGTCTTG 212213 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || |||||||| ||||| || |||||| Sbjct 212212 CCAGTAAGAGTCTTGACAAAAATTTGCATA 212183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632915530344