Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq2 140 3e-28
>seq2
Length=4043926
Score = 140 bits (154), Expect = 3e-28
Identities = 262/379 (69%), Gaps = 6/379 (2%)
Strand=Plus/Plus
Query 30008 TGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30067
||||||| || || || ||||| || |||| |||||||| |||| || |||||
Sbjct 1046205 TGTGGCATGGCGGCAGCGCCATCTTCTTCAGGTCTGCAGGGTTCCACGCGCTCATGATGA 1046264
Query 30068 TGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCC 30127
| || | ||| | |||||||| ||| || ||| | | ||||| || || |
Sbjct 1046265 TCCGGCGGTCGTACGGGTTGTTTTTGAGCTTGTGCACCACCTCCGCGAGCTGGTCGACGC 1046324
Query 30128 CCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGA 30187
| ||| | ||| || | | | ||| || || || || ||||||| ||||||||
Sbjct 1046325 CTTGCCCTGTGTAATCCGTCTTGGCGTCGACATATTCCGCCCCAAAATGCCGCCACTGGA 1046384
Query 30188 ACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA-AGCCCCTC-TTGTCCAA 30245
|||| ||||| || |||||||| || | || | ||| ||| || ||| | |||| |
Sbjct 1046385 ACCCATACACAGGGCCCAGGTCGCCGACCTCGCGGTG--CGACAGTCCCACACTGTCGAG 1046442
Query 30246 AAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGA 30305
|| || | ||| |||||| | ||||||||||| || ||| |||||||| |||
Sbjct 1046443 GAACTCGCGGGACCCGTTGCCATCCCAGATCTTGACGCCCGCTTCGGAGAGGGGCAAGGA 1046502
Query 30306 GTTTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCC 30364
| ||| | ||||| ||||||||| || ||||| | |||||||| ||| ||||| |
Sbjct 1046503 GGAGGTGCAGCCCTC-GACGAACCAGAGGAGCTCGGCGACGACGGCTTTCAGGAAGACGC 1046561
Query 30365 TCTTGGTCGTGAGGAGGGG 30383
||| ||||||||||| ||
Sbjct 1046562 GCTTTGTCGTGAGGAGCGG 1046580
Score = 100 bits (110), Expect = 2e-16
Identities = 198/289 (69%), Gaps = 7/289 (2%)
Strand=Plus/Plus
Query 29686 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGTTCTCCACC 29745
|| || ||||| ||| || ||||||||| |||| | |||| | || || ||
Sbjct 1045820 TGCGGCTCGTAGCCCAGCACCACGAAATCCTCCACCTTCCACCCGTCAATACTC-CCGCC 1045878
Query 29746 CT----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 29801
|| ||| || ||| ||| | ||||| || ||||||| ||||| ||| |||
Sbjct 1045879 CTTCTCCCTCTTGATCTCCAGCTTCGGAAACTCCCTCGGCTCCCGCTCGACCTGCACCTT 1045938
Query 29802 CAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTC 29860
|||| |||||||| || ||| ||||| ||||| |||| | ||| | | || |
Sbjct 1045939 GAGCGCGTCCACGTGGTCGCAGTACACGTGCGCGTCGCCCATGACGTGCGTGAGGCTG-C 1045997
Query 29861 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29920
|||| | || || |||| || | ||||| |||||| || | ||||||||||||||
Sbjct 1045998 CCGGCACGAGGTCGCACACGTACGCGAGCATGTGCGTGAGCAGCGCGTAGCTGGCGATGT 1046057
Query 29921 TAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969
| ||||| || || || ||||| || | || | ||||||||||| ||
Sbjct 1046058 TGAAGGGCACGCCCAGGCCCATATCGCAGGAGCGTTGGTAGAGCTGGCA 1046106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408616738455329
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |