Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq2 140 3e-28 >seq2 Length=4043926 Score = 140 bits (154), Expect = 3e-28 Identities = 262/379 (69%), Gaps = 6/379 (2%) Strand=Plus/Plus Query 30008 TGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30067 ||||||| || || || ||||| || |||| |||||||| |||| || ||||| Sbjct 1046205 TGTGGCATGGCGGCAGCGCCATCTTCTTCAGGTCTGCAGGGTTCCACGCGCTCATGATGA 1046264 Query 30068 TGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCC 30127 | || | ||| | |||||||| ||| || ||| | | ||||| || || | Sbjct 1046265 TCCGGCGGTCGTACGGGTTGTTTTTGAGCTTGTGCACCACCTCCGCGAGCTGGTCGACGC 1046324 Query 30128 CCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGA 30187 | ||| | ||| || | | | ||| || || || || ||||||| |||||||| Sbjct 1046325 CTTGCCCTGTGTAATCCGTCTTGGCGTCGACATATTCCGCCCCAAAATGCCGCCACTGGA 1046384 Query 30188 ACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA-AGCCCCTC-TTGTCCAA 30245 |||| ||||| || |||||||| || | || | ||| ||| || ||| | |||| | Sbjct 1046385 ACCCATACACAGGGCCCAGGTCGCCGACCTCGCGGTG--CGACAGTCCCACACTGTCGAG 1046442 Query 30246 AAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGA 30305 || || | ||| |||||| | ||||||||||| || ||| |||||||| ||| Sbjct 1046443 GAACTCGCGGGACCCGTTGCCATCCCAGATCTTGACGCCCGCTTCGGAGAGGGGCAAGGA 1046502 Query 30306 GTTTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCC 30364 | ||| | ||||| ||||||||| || ||||| | |||||||| ||| ||||| | Sbjct 1046503 GGAGGTGCAGCCCTC-GACGAACCAGAGGAGCTCGGCGACGACGGCTTTCAGGAAGACGC 1046561 Query 30365 TCTTGGTCGTGAGGAGGGG 30383 ||| ||||||||||| || Sbjct 1046562 GCTTTGTCGTGAGGAGCGG 1046580 Score = 100 bits (110), Expect = 2e-16 Identities = 198/289 (69%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 29686 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGTTCTCCACC 29745 || || ||||| ||| || ||||||||| |||| | |||| | || || || Sbjct 1045820 TGCGGCTCGTAGCCCAGCACCACGAAATCCTCCACCTTCCACCCGTCAATACTC-CCGCC 1045878 Query 29746 CT----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 29801 || ||| || ||| ||| | ||||| || ||||||| ||||| ||| ||| Sbjct 1045879 CTTCTCCCTCTTGATCTCCAGCTTCGGAAACTCCCTCGGCTCCCGCTCGACCTGCACCTT 1045938 Query 29802 CAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTC 29860 |||| |||||||| || ||| ||||| ||||| |||| | ||| | | || | Sbjct 1045939 GAGCGCGTCCACGTGGTCGCAGTACACGTGCGCGTCGCCCATGACGTGCGTGAGGCTG-C 1045997 Query 29861 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29920 |||| | || || |||| || | ||||| |||||| || | |||||||||||||| Sbjct 1045998 CCGGCACGAGGTCGCACACGTACGCGAGCATGTGCGTGAGCAGCGCGTAGCTGGCGATGT 1046057 Query 29921 TAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969 | ||||| || || || ||||| || | || | ||||||||||| || Sbjct 1046058 TGAAGGGCACGCCCAGGCCCATATCGCAGGAGCGTTGGTAGAGCTGGCA 1046106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616738455329