Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq22 565 5e-156 seq3 178 2e-39 >seq22 Length=534521 Score = 565 bits (626), Expect = 5e-156 Identities = 1267/1873 (68%), Gaps = 70/1873 (4%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 ||||||||||| | || | ||||||||||| ||| || || ||||||||||||||||| Sbjct 118490 ACCGTAAACTGGATAGGCTGAGCAGCAGCCTGGGTACGAAGGTAGTACATGCCGGTCTTG 118431 Query 212613 AGGCC---CTTGCCCCAGCC-GTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATAT 212667 || || ||| |||||| ||| | |||||| |||| ||| |||| | || Sbjct 118430 AGACCGAGCTT---CCAGCCAGTGAA-GTGCAT-GCTGGTGA---TCTTGCCC-----AT 118384 Query 212668 TCTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGG 212727 | ||| | || || || | |||||| ||||| ||| || || || | Sbjct 118383 TGTGGGGTCCTTCATG-------TGGATGTTCAGAGACTGGGACTGATCAATAAAAGCAC 118331 Query 212728 CCCTGTCAGCGGCCATGTCTATGA-TATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAG 212786 | | ||| || ||||| | | || | || ||||| |||| |||||| ||||||||| || Sbjct 118330 CGCGGTCGGCAGCCATTTGCACGACTGTC-CTCTGAGAGATCTCCCAGACGGTCTTGTAG 118272 Query 212787 ATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC--CCTGTGTA-TG 212843 | | |||| || | |||| | |||||||||||| ||||| || ||| | | || Sbjct 118271 AGAGCCTTGACATCGGCGGGGATGTTGGGGATGTTCTGAACAGAACCGCCCTCGGCAATG 118212 Query 212844 GTCAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGG 212903 | | | | |||| || |||||| ||| || | ||| ||||| || Sbjct 118211 ATGCGGTTCTT---CATGCTGTCAGACCAGAGACCCATGTCGACAAGGTCCTTGAGGAGC 118155 Query 212904 TGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTG 212963 ||||||||| | |||||||||||||| |||||| | | | ||| | |||||| ||| Sbjct 118154 CAAGGGTTGACGACCTGGAAGTCACCTGCGAGCACACGACGCGAGTAGATGTTTGAGGTG 118095 Query 212964 TAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGA 213023 || ||||| | || ||||||||| || |||||||| | || ||||| || |||||||| Sbjct 118094 TAAGGCTCAAAGCACTCGTTGTTGCCGAGAATCTGGGAGGTACTGGCAGTAGGCATGGGG 118035 Query 213024 GCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC--GAAGCTCTGCCC 213081 || ||||| | |||||| | || || ||||| ||| | | || || ||| |||| Sbjct 118034 GCGACCAGCAAACTGTTGCGGACACCATGCTCCTTGATCTG-CTCCTTGAGGCTG-GCCC 117977 Query 213082 AGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGC 213141 ||||||| || ||| | | || ||||||||||| |||| | ||| | Sbjct 117976 AGTCCCAG---------AGATCCGTGGGGGTGACATTCCACATGTCGTACTGGAGGATAC 117926 Query 213142 CTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGC 213201 | | || || ||||| ||||| |||||| ||||||||||||||||| ||| Sbjct 117925 CCTGCGAGACAGGAGAGCCCTCGTAAGTGGAGTAAGGGCCATGCTCCTTGGCGCACTCCA 117866 Query 213202 AGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGG 213261 || || || ||||||| ||||||||| || || |||| | ||||||||| | | Sbjct 117865 TAGAGGCAGTAAGCGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTGTCTAG 117806 Query 213262 CCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCC 213321 |||| || ||| ||| ||||| || |||| |||| || || ||||| || | Sbjct 117805 CCTCGGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAGGCATCGGCGAGACCCTGAACAC 117746 Query 213322 CGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGT 213381 ||| |||||||| | ||| | || ||| ||| | ||||| || |||||| ||| Sbjct 117745 CGAGACCGATGGGGCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGCACGGGGTAGTAGT 117686 Query 213382 TGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACT 213441 || || ||||||||||| |||||||| || ||| || | | || | || Sbjct 117685 TGATATCAATGATCTTGTTCAGGTTGCGAACAATGACACGGGTAACGTCGTGGAGCTTCT 117626 Query 213442 CGTGATTGAACACGTAGCCCCC--GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAG 213499 | | | | ||| ||| | || | || |||| ||||| || | | |||| Sbjct 117625 GGAAGTCGTAGACG--GCCTCGTTGTAGTCAACGAACTGGGGCAGAGCCAGGGAAGCCAA 117568 Query 213500 GTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCT 213559 ||||| || || ||||| | | | | | |||||| |||||||| ||||| |||||| Sbjct 117567 ATTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATGATCTCAGTGCAGAGGTTGGA 117508 Query 213560 GCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAG 213619 || |||||||| |||| ||||| ||||| ||| |||||||| |||||||||||| Sbjct 117507 GCTGCGGATGGTTCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAG 117448 Query 213620 CATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGC 213679 |||| | ||| |||||||| ||| | | | || || | ||| || | | ||| Sbjct 117447 CATGAAAGGGTTACCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCACAGCTTCTGGGC 117388 Query 213680 CTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAA 213739 ||||| | | | | ||| | | || |||||||||| ||||| || | | ||| Sbjct 117387 CTTGATCTTCTGAC-GACCACGACCCTCG--GCCTCGTACTTCTCGTACAGAGCCTCGAA 117331 Query 213740 TTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTC 213799 |||| ||| | || | | || || || || |||||||||||| |||| || Sbjct 117330 CTCGTCGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAGTCCACTC 117271 Query 213800 CCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGT 213858 ||| || |||| ||| | || |||||||||||| || | ||| || ||| ||| || | Sbjct 117270 GCCGTTCTTCTC-GACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGAAGAGAT 117212 Query 213859 CCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGT 213918 | | || | |||| ||| || ||| ||||| || || || || ||||||| | Sbjct 117211 CACGGGCACGGATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACAT 117152 Query 213919 CCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTC---TTGCCGCCCTGGT 213975 |||||||||| ||||| | ||| ||||| || ||||| || ||| ||||||||||||| Sbjct 117151 CCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCCGCCCTGGT 117092 Query 213976 CCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTC 214035 | || ||||| ||||||||| ||||| | ||| || | |||||||| | Sbjct 117091 CGACGTATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGTTGGAGGTAC 117032 Query 214036 CGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGC 214095 ||||||| || || || || ||||||| || | | | | ||| || || || | Sbjct 117031 CGTTGGTGCCGGCAATGTAGGAGCCGGTAGCACGGATGCGGTGGATGTTCAGACCAATAC 116972 Query 214096 CACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGC 214155 |||| || ||||||||||||||| ||| | | | ||| || ||||||| | |||| Sbjct 116971 CACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATGCCGTCAATGC 116912 Query 214156 TGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAG--CCAGA 214213 | ||||| | | || | | ||||||| ||| |||| | |||||| ||| |||| Sbjct 116911 TATCATCCTTCATGTCGACAAGGAAGCAGGACGAAAGCT-GAGCCTGG-GGAGTACCAGC 116854 Query 214214 GTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTC 214273 |||||| || ||||| |||||| | | ||||| | || | ||| |||| ||||| Sbjct 116853 GTTGAACAGGGTGGGAGAGGCATGTGTGAAGTACTTGCTTGACATGAGGTTGTAAGTCTC 116794 Query 214274 CAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG-CGCACCTCATCAGCATGTGCT 214332 | ||| ||||||| |||||| | || | || | ||| | |||||||| Sbjct 116793 AATGACACGCTCAATGTCGTCGCCGTGGATGCCGACAGACACA-CGCATGATCATGTGCT 116735 Query 214333 GGGGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCT 214389 |||| | || | || || ||| | |||||||||||| |||||||| || |||| Sbjct 116734 GGGGACGCTCGACGATCTTGCCGTTGAG---CTTGAGCAGGTATGAGCGCTCGAGGGTCT 116678 Query 214390 TGAACCCAAAGTA 214402 |||| |||||||| Sbjct 116677 TGAAGCCAAAGTA 116665 >seq3 Length=3980562 Score = 178 bits (196), Expect = 2e-39 Identities = 346/505 (69%), Gaps = 11/505 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || ||| ||||||||||| Sbjct 2739520 CTGGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTC 2739461 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| |||||||||| | || ||| | || ||| | | || | Sbjct 2739460 CATGAAGTCAAAGGGGTTGGTGGCACGGTAGACCT-TCTCGTTGCCGAGAGCGACGAGGA 2739402 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || |||||| |||||||||| | ||||||| | ||||||||| | |||| Sbjct 2739401 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCCAAGCAGGG 2739342 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||||| ||||| || || ||||||| || |||| || || || | |||| Sbjct 2739341 CGCAGGGCAGAGCCTCGGTAAGGAACTCCTGTTCGATCTTGACAGCATCGATGATGATCT 2739282 Query 48078 GCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 || ||| | || ||| || | || ||| ||||| || | || | ||||| Sbjct 2739281 CCTCGACGAGCTTCTTGCTGGGGCGGTTCTTG---AGGTG---GGAGAACAGGAGGCAGG 2739228 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 ||||||| |||| | ||| ||||| || ||||||| ||||||||||| ||| || | Sbjct 2739227 CAAAGTCAGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCGG 2739168 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||||| || | || ||||||||||| || | ||||| | || ||||||||| | Sbjct 2739167 GCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATAC 2739108 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314 |||| || || || || || |||| | || |||| | || | | ||| ||||||| Sbjct 2739107 CCTCGACCGCAGCAAAGGCAATGAGGCGCTGAGCGAAGGTAGACTCCCGGTCGGAGATCC 2739048 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTT 48339 | || |||||||| |||||||| Sbjct 2739047 ACTTCAGAGCCCAGTCGGCCTTCTT 2739023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530785560320