Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq22 360 4e-94 seq3 161 2e-34 >seq22 Length=534521 Score = 360 bits (398), Expect = 4e-94 Identities = 861/1277 (67%), Gaps = 45/1277 (4%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT-TGGCCTCGGG 221475 || || |||||||||||||||||||| |||||| ||||||||| || | | |||||||| Sbjct 117857 GTAAGCGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG-CTGTCTAGCCTCGGG 117799 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 ||| ||| ||||| ||||| | ||| | ||||| || ||||| || |||| ||| Sbjct 117798 AGACTCGAAAGGCATGCGCAGAGCAAGGAAGGCATCGGCGAGACCCTGAACACCGAGACC 117739 Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593 |||||| | ||| | | ||||| | |||| | || ||| |||||| || |||||| Sbjct 117738 GATGGGGCGGTGGCGCATGTTGCTGTTGCGGGC-CTCCTG-CACGGGGTAGTAGTTGATA 117681 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 || || | ||||| ||||| || ||||| || ||| ||||||||| Sbjct 117680 TCAATGATCTTGTTCAGGTTGCGAACAATGACACGGGTAACGTCGTGGAGCTTCTGGAAG 117621 Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713 | | | || |||| || || || || || | || || | | Sbjct 117620 TCGTAGACGGCCTCGT--------TGTAG----TCAACGAACTGGGGCAGAGCCAGGGAA 117573 Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 |||| || || || || ||||| || | | |||| |||||||| || |||||| Sbjct 117572 GCCAAATTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATGATCTCAGTGCAGAGG 117513 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833 ||| || |||||| |||| || || || || |||||| |||||||| |||||| Sbjct 117512 TTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTG 117453 Query 221834 TAGAGCAT-AAAGGG--ACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGT 221890 |||||||| |||||| |||| ||||| ||||||| | || || || ||| || Sbjct 117452 TAGAGCATGAAAGGGTTACCG---GTCTCAGTCTGAGCCTCGAGGATGGCGTACCACAGC 117396 Query 221891 TCTCTGGCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATAGAG 221949 | ||||| || | || ||| | |||||||| || | | | | ||| |||| Sbjct 117395 T-TCTGGGCCTTGATCTTCTGACGACCACGACCCTCGGCCTCGTACTTCTC-GTACAGAG 117338 Query 221950 CATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAG 222009 | || |||| || |||||| | ||| | ||||| || ||| | ||||||||| || Sbjct 117337 C--CTCGAACTCGTCGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAG 117280 Query 222010 ACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTG 222069 | |||| | ||| | | ||| | || |||||| ||||| || ||||| || || | Sbjct 117279 AGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAG 117220 Query 222070 AAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTC 222129 |||||||| | || || ||||||| ||||| ||| || | || || | ||||| Sbjct 117219 GAAGAGATCACGGGCACGGATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTC 117160 Query 222130 AAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCC 222189 ||| | || |||||||| ||||| || || | ||| | |||||| |||| ||||||||| Sbjct 117159 AAAGACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCC 117100 Query 222190 ACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGT 222248 ||||| || || || ||| | |||||||| || || | || || | |||| Sbjct 117099 GCCCTGGTCGACGTATCT-GGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGT 117041 Query 222249 TGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGGCAG- 222305 |||| |||||||||||| |||||| | ||| || | || | | ||| | Sbjct 117040 TGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCGGTAGCAC---GGATGCGGTGGATGT 116984 Query 222306 ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGA 222365 || || |||||||| || || ||||||||||| ||| ||||||||||||| || Sbjct 116983 TCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGA 116924 Query 222366 TGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGG 222425 |||| || || || ||||| | || | || || || ||||| | ||||| | || Sbjct 116923 TGCCGTCAATGCTATCATCCTTCATGTCGACAAGGAAGCAGGACGAAAGCTGAGCCTGGG 116864 Query 222426 TGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGAT 222485 | || ||||| ||||| |||||| ||| ||||| ||||| || ||||| || | Sbjct 116863 GAGTACCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAAGTACTTGCTTGACATGAGGT 116804 Query 222486 CGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT-CTGCATGGCGCATCTCATG 222544 ||| ||||| | ||| | | |||| ||| ||||| || | | | | || | |||| Sbjct 116803 TGTAAGTCTCAATGACACGCTCAATGTCGTCGCCGTGGATGCCGACAGACACA-CGCATG 116745 Query 222545 TACATGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGATTTT 222601 ||||| |||||| | ||| || | | || | ||||| ||||||||| || Sbjct 116744 ATCATGTGCTGGGGACGCTCGAC-GATCTTGCCGTTGAGCT--TGAGCAGGTATGAGCGC 116688 Query 222602 TCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCG 222661 || || |||||||| |||||||| | | || ||||| | | ||| || | ||| | | Sbjct 116687 TCGAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTACACAATGGCCGAG 116628 Query 222662 TCCAGCTCCGACTTGTG 222678 || ||||| |||||| Sbjct 116627 TCGAGCTCGTCCTTGTG 116611 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | |||||| | | | ||| | ||| || ||| | || Sbjct 118149 GTTGACGACCTGGAAGTCACCTGCGAGCACACGACGCGAGTAGATGTTTGAGGTGTAAGG 118090 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 || | || |||||||||||| || ||||| | || ||||| || |||||||| || || Sbjct 118089 CTCAAAGCACTCGTTGTTGCCGAGAATCTGGGAGGTACTGGCAGTAGGCATGGGGGCGAC 118030 Query 221236 CAGCAGACTGTTGCG 221250 ||||| ||||||||| Sbjct 118029 CAGCAAACTGTTGCG 118015 >seq3 Length=3980562 Score = 161 bits (178), Expect = 2e-34 Identities = 327/491 (67%), Gaps = 9/491 (2%) Strand=Plus/Plus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 ||||| ||||||||||| | || | |||| || | |||| || | |||||| Sbjct 2739035 TGGGCTCTGAAGTGGATCTCCGACCGGGAGTCTACCTTCGCTCAGCGCCTCATTGCCTTT 2739094 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 ||||| || ||||| ||||| ||||||||| | || || ||||||||||||||||| || Sbjct 2739095 GCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAG 2739154 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 || ||||||||| || ||| ||||||||||||||| | |||||||| ||| Sbjct 2739155 CGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGCCTC 2739214 Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA--ACCTTCTCAAG 26071 |||| || ||||||||||| || | | | |||| ||| | || || |||| Sbjct 2739215 CACACTGACTTTGCCTGCCTCCTGTTCTC---CCAC---CTCAAGAACCGCCCCAGCAAG 2739268 Query 26072 -AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNN 26130 || |||| | ||||||| || ||||| ||||||| ||||||| | Sbjct 2739269 AAGCTCGTCGAGGAGATCATCATCGATGCTGTCAAGATCGAACAGGAGTTCCTTACCGAG 2739328 Query 26131 NNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTAT 26190 | ||||||||| | ||||||| || ||||| |||| Sbjct 2739329 GCTCTGCCCTGCGCCCTGCTTGGCATGAACTCGAACCTCATGAAGCAGTACATCGAGTTC 2739388 Query 26191 GTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCG 26250 || ||||||| || || | || || || | ||||| || | | ||||| Sbjct 2739389 GTCGCCGACCGCCTCCTCGTCGCTCTCGGCAACGAGAAGGTCTACCGTGCCACCAACCCC 2739448 Query 26251 TTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTC 26310 || ||||| ||||| ||||| || ||| || |||||||||||||| || ||| | ||| Sbjct 2739449 TTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTC 2739508 Query 26311 GGCGACTATCA 26321 ||||| || || Sbjct 2739509 GGCGAGTACCA 2739519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842791373120