Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq22 360 4e-94
seq3 161 2e-34
>seq22
Length=534521
Score = 360 bits (398), Expect = 4e-94
Identities = 861/1277 (67%), Gaps = 45/1277 (4%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT-TGGCCTCGGG 221475
|| || |||||||||||||||||||| |||||| ||||||||| || | | ||||||||
Sbjct 117857 GTAAGCGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG-CTGTCTAGCCTCGGG 117799
Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535
||| ||| ||||| ||||| | ||| | ||||| || ||||| || |||| |||
Sbjct 117798 AGACTCGAAAGGCATGCGCAGAGCAAGGAAGGCATCGGCGAGACCCTGAACACCGAGACC 117739
Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593
|||||| | ||| | | ||||| | |||| | || ||| |||||| || ||||||
Sbjct 117738 GATGGGGCGGTGGCGCATGTTGCTGTTGCGGGC-CTCCTG-CACGGGGTAGTAGTTGATA 117681
Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653
|| || | ||||| ||||| || ||||| || ||| |||||||||
Sbjct 117680 TCAATGATCTTGTTCAGGTTGCGAACAATGACACGGGTAACGTCGTGGAGCTTCTGGAAG 117621
Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713
| | | || |||| || || || || || | || || | |
Sbjct 117620 TCGTAGACGGCCTCGT--------TGTAG----TCAACGAACTGGGGCAGAGCCAGGGAA 117573
Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773
|||| || || || || ||||| || | | |||| |||||||| || ||||||
Sbjct 117572 GCCAAATTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATGATCTCAGTGCAGAGG 117513
Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833
||| || |||||| |||| || || || || |||||| |||||||| ||||||
Sbjct 117512 TTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTG 117453
Query 221834 TAGAGCAT-AAAGGG--ACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGT 221890
|||||||| |||||| |||| ||||| ||||||| | || || || ||| ||
Sbjct 117452 TAGAGCATGAAAGGGTTACCG---GTCTCAGTCTGAGCCTCGAGGATGGCGTACCACAGC 117396
Query 221891 TCTCTGGCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATAGAG 221949
| ||||| || | || ||| | |||||||| || | | | | ||| ||||
Sbjct 117395 T-TCTGGGCCTTGATCTTCTGACGACCACGACCCTCGGCCTCGTACTTCTC-GTACAGAG 117338
Query 221950 CATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAG 222009
| || |||| || |||||| | ||| | ||||| || ||| | ||||||||| ||
Sbjct 117337 C--CTCGAACTCGTCGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAG 117280
Query 222010 ACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTG 222069
| |||| | ||| | | ||| | || |||||| ||||| || ||||| || || |
Sbjct 117279 AGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAG 117220
Query 222070 AAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTC 222129
|||||||| | || || ||||||| ||||| ||| || | || || | |||||
Sbjct 117219 GAAGAGATCACGGGCACGGATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTC 117160
Query 222130 AAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCC 222189
||| | || |||||||| ||||| || || | ||| | |||||| |||| |||||||||
Sbjct 117159 AAAGACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCC 117100
Query 222190 ACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGT 222248
||||| || || || ||| | |||||||| || || | || || | ||||
Sbjct 117099 GCCCTGGTCGACGTATCT-GGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGT 117041
Query 222249 TGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGGCAG- 222305
|||| |||||||||||| |||||| | ||| || | || | | ||| |
Sbjct 117040 TGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCGGTAGCAC---GGATGCGGTGGATGT 116984
Query 222306 ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGA 222365
|| || |||||||| || || ||||||||||| ||| ||||||||||||| ||
Sbjct 116983 TCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGA 116924
Query 222366 TGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGG 222425
|||| || || || ||||| | || | || || || ||||| | ||||| | ||
Sbjct 116923 TGCCGTCAATGCTATCATCCTTCATGTCGACAAGGAAGCAGGACGAAAGCTGAGCCTGGG 116864
Query 222426 TGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGAT 222485
| || ||||| ||||| |||||| ||| ||||| ||||| || ||||| || |
Sbjct 116863 GAGTACCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAAGTACTTGCTTGACATGAGGT 116804
Query 222486 CGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT-CTGCATGGCGCATCTCATG 222544
||| ||||| | ||| | | |||| ||| ||||| || | | | | || | ||||
Sbjct 116803 TGTAAGTCTCAATGACACGCTCAATGTCGTCGCCGTGGATGCCGACAGACACA-CGCATG 116745
Query 222545 TACATGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGATTTT 222601
||||| |||||| | ||| || | | || | ||||| ||||||||| ||
Sbjct 116744 ATCATGTGCTGGGGACGCTCGAC-GATCTTGCCGTTGAGCT--TGAGCAGGTATGAGCGC 116688
Query 222602 TCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCG 222661
|| || |||||||| |||||||| | | || ||||| | | ||| || | ||| | |
Sbjct 116687 TCGAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTACACAATGGCCGAG 116628
Query 222662 TCCAGCTCCGACTTGTG 222678
|| ||||| ||||||
Sbjct 116627 TCGAGCTCGTCCTTGTG 116611
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| || || | |||||| | | | ||| | ||| || ||| | ||
Sbjct 118149 GTTGACGACCTGGAAGTCACCTGCGAGCACACGACGCGAGTAGATGTTTGAGGTGTAAGG 118090
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|| | || |||||||||||| || ||||| | || ||||| || |||||||| || ||
Sbjct 118089 CTCAAAGCACTCGTTGTTGCCGAGAATCTGGGAGGTACTGGCAGTAGGCATGGGGGCGAC 118030
Query 221236 CAGCAGACTGTTGCG 221250
||||| |||||||||
Sbjct 118029 CAGCAAACTGTTGCG 118015
>seq3
Length=3980562
Score = 161 bits (178), Expect = 2e-34
Identities = 327/491 (67%), Gaps = 9/491 (2%)
Strand=Plus/Plus
Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893
||||| ||||||||||| | || | |||| || | |||| || | ||||||
Sbjct 2739035 TGGGCTCTGAAGTGGATCTCCGACCGGGAGTCTACCTTCGCTCAGCGCCTCATTGCCTTT 2739094
Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953
||||| || ||||| ||||| ||||||||| | || || ||||||||||||||||| ||
Sbjct 2739095 GCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAG 2739154
Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013
|| ||||||||| || ||| ||||||||||||||| | |||||||| |||
Sbjct 2739155 CGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGCCTC 2739214
Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA--ACCTTCTCAAG 26071
|||| || ||||||||||| || | | | |||| ||| | || || ||||
Sbjct 2739215 CACACTGACTTTGCCTGCCTCCTGTTCTC---CCAC---CTCAAGAACCGCCCCAGCAAG 2739268
Query 26072 -AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNN 26130
|| |||| | ||||||| || ||||| ||||||| ||||||| |
Sbjct 2739269 AAGCTCGTCGAGGAGATCATCATCGATGCTGTCAAGATCGAACAGGAGTTCCTTACCGAG 2739328
Query 26131 NNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTAT 26190
| ||||||||| | ||||||| || ||||| ||||
Sbjct 2739329 GCTCTGCCCTGCGCCCTGCTTGGCATGAACTCGAACCTCATGAAGCAGTACATCGAGTTC 2739388
Query 26191 GTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCG 26250
|| ||||||| || || | || || || | ||||| || | | |||||
Sbjct 2739389 GTCGCCGACCGCCTCCTCGTCGCTCTCGGCAACGAGAAGGTCTACCGTGCCACCAACCCC 2739448
Query 26251 TTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTC 26310
|| ||||| ||||| ||||| || ||| || |||||||||||||| || ||| | |||
Sbjct 2739449 TTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTC 2739508
Query 26311 GGCGACTATCA 26321
||||| || ||
Sbjct 2739509 GGCGAGTACCA 2739519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928842791373120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |