Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq6 122 3e-22 seq5 104 7e-17 >seq6 Length=1332594 Score = 122 bits (134), Expect = 3e-22 Identities = 206/296 (70%), Gaps = 2/296 (1%) Strand=Plus/Minus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| | ||||| | ||| || || || |||||||| | ||| || ||||| Sbjct 1033860 TCTTCCAGAGCCTTGACGAGACGTCGTTGGATGTAACCAGTCTCGGCTGTCTTGACAGCA 1033801 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AG 302690 ||||| || ||||| |||||||| |||| || |||||| | | ||| || ||| | Sbjct 1033800 GTATCGATGAGACCTTCACGACCAGCCATGGCGTGGAAGTAAAACTCGGAAGG-CGTCAA 1033742 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | || | || |||||||||| ||||| ||||| || || | || |||||| Sbjct 1033741 TCCACGAAGGTACGAATTCTCAACGAAGCCACGGGCCTCAGGAGAGTAATCATCCTTGGT 1033682 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| || || || | | || |||| | || |||||||| || || ||| |||| Sbjct 1033681 GAAGTGCGGAAGTGTGCGATACTTGAAGCCAAACGGAATACGCTTGCCTTCCACGATCTG 1033622 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866 ||| || | | | | ||||||||||||| || | || |||||||| |||| Sbjct 1033621 CTGGCCGACGAGGGCACTCATCTGCGAAATGTTGATTGCAGAACCCTTGGAACCAG 1033566 >seq5 Length=2741173 Score = 104 bits (114), Expect = 7e-17 Identities = 116/152 (76%), Gaps = 6/152 (4%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 |||||||| ||||||||| || ||||| ||||| ||||||||||||||||| | | Sbjct 1510614 TGGGCGATCGTCATACGAGACGGGATAGCGTGGGGGTTGATGATGATGTCGGGAGTGATG 1510555 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCCTTT 251955 || ||| ||||| ||||| ||| |||| | |||| || |||||||| ||||| Sbjct 1510554 CCTTCACGCGTGAAAGGCATGTCC---TCCTGACGATAAGTGACACCAATAGTGCCCTTC 1510498 Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 || |||||||| || ||| ||||||||||| Sbjct 1510497 TGACCGTGACGCGAGGCGAATTTATCACCAAT 1510466 Score = 86.0 bits (94), Expect = 2e-11 Identities = 173/255 (68%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || |||||||| | | || | ||||| | | | ||||| || | || | || || Sbjct 1511046 ATGAGACCACAGATCTCGCAGATGTGGACTCGGAAGGCATCCGACACCTCGAACAGACGC 1510987 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 ||||| ||| || || ||||| | |||||| ||||||||||||||||| || ||| Sbjct 1510986 TCCTTGAGGAAAGCAGCGGCGCCGTGAGCAATCATGCAATCACGCTCCATTTCTCCAAAA 1510927 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAAC--CATAG 251584 || | ||||||||| | || | ||| || | ||||||| ||| |||| | || | Sbjct 1510926 CGCAAACCACCATCCCTGGCACGACCTTCCACGGGCTGAC--GTGTCATTATCTGCACGG 1510869 Query 251585 GACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATG 251644 | ||| | |||| || ||| || | |||||||| |||||||||||| | | Sbjct 1510868 GGCCGCGAGCGCGGGCGTGAATCTTGTCGTCCACCATATGACGCAGACGCTGGTAGTAGG 1510809 Query 251645 CGGGACCGATGAAGA 251659 || || | ||||| Sbjct 1510808 TTGGCCCAAAGAAGA 1510794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814337624301