Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq6 122 3e-22
seq5 104 7e-17
>seq6
Length=1332594
Score = 122 bits (134), Expect = 3e-22
Identities = 206/296 (70%), Gaps = 2/296 (1%)
Strand=Plus/Minus
Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631
||||||| | ||||| | ||| || || || |||||||| | ||| || |||||
Sbjct 1033860 TCTTCCAGAGCCTTGACGAGACGTCGTTGGATGTAACCAGTCTCGGCTGTCTTGACAGCA 1033801
Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AG 302690
||||| || ||||| |||||||| |||| || |||||| | | ||| || ||| |
Sbjct 1033800 GTATCGATGAGACCTTCACGACCAGCCATGGCGTGGAAGTAAAACTCGGAAGG-CGTCAA 1033742
Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750
|| | || | || |||||||||| ||||| ||||| || || | || ||||||
Sbjct 1033741 TCCACGAAGGTACGAATTCTCAACGAAGCCACGGGCCTCAGGAGAGTAATCATCCTTGGT 1033682
Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810
||||| || || || | | || |||| | || |||||||| || || ||| ||||
Sbjct 1033681 GAAGTGCGGAAGTGTGCGATACTTGAAGCCAAACGGAATACGCTTGCCTTCCACGATCTG 1033622
Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866
||| || | | | | ||||||||||||| || | || |||||||| ||||
Sbjct 1033621 CTGGCCGACGAGGGCACTCATCTGCGAAATGTTGATTGCAGAACCCTTGGAACCAG 1033566
>seq5
Length=2741173
Score = 104 bits (114), Expect = 7e-17
Identities = 116/152 (76%), Gaps = 6/152 (4%)
Strand=Plus/Minus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|||||||| ||||||||| || ||||| ||||| ||||||||||||||||| | |
Sbjct 1510614 TGGGCGATCGTCATACGAGACGGGATAGCGTGGGGGTTGATGATGATGTCGGGAGTGATG 1510555
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCCTTT 251955
|| ||| ||||| ||||| ||| |||| | |||| || |||||||| |||||
Sbjct 1510554 CCTTCACGCGTGAAAGGCATGTCC---TCCTGACGATAAGTGACACCAATAGTGCCCTTC 1510498
Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
|| |||||||| || ||| |||||||||||
Sbjct 1510497 TGACCGTGACGCGAGGCGAATTTATCACCAAT 1510466
Score = 86.0 bits (94), Expect = 2e-11
Identities = 173/255 (68%), Gaps = 4/255 (2%)
Strand=Plus/Minus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| |||||||| | | || | ||||| | | | ||||| || | || | || ||
Sbjct 1511046 ATGAGACCACAGATCTCGCAGATGTGGACTCGGAAGGCATCCGACACCTCGAACAGACGC 1510987
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
||||| ||| || || ||||| | |||||| ||||||||||||||||| || |||
Sbjct 1510986 TCCTTGAGGAAAGCAGCGGCGCCGTGAGCAATCATGCAATCACGCTCCATTTCTCCAAAA 1510927
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAAC--CATAG 251584
|| | ||||||||| | || | ||| || | ||||||| ||| |||| | || |
Sbjct 1510926 CGCAAACCACCATCCCTGGCACGACCTTCCACGGGCTGAC--GTGTCATTATCTGCACGG 1510869
Query 251585 GACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATG 251644
| ||| | |||| || ||| || | |||||||| |||||||||||| | |
Sbjct 1510868 GGCCGCGAGCGCGGGCGTGAATCTTGTCGTCCACCATATGACGCAGACGCTGGTAGTAGG 1510809
Query 251645 CGGGACCGATGAAGA 251659
|| || | |||||
Sbjct 1510808 TTGGCCCAAAGAAGA 1510794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471814337624301
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |