Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq22 172 5e-38 seq9 100 3e-16 seq25 98.7 9e-16 >seq22 Length=534521 Score = 172 bits (190), Expect = 5e-38 Identities = 972/1531 (63%), Gaps = 54/1531 (4%) Strand=Plus/Minus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | |||||| || ||||| || | || ||||| ||| ||||| |||| |||| Sbjct 118149 GTTGACGACCTGGAAGTCACCTGCGAGCACACGACGCGAGTAGATGTTTGAGGTGTAAGG 118090 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 |||||| | |||||||| || |||||||| | || | || || |||||| || || Sbjct 118089 CTCAAAGCACTCGTTGTTGCCGAGAATCTGGGAGGTACTGGCAGTAGGCATGGGGGCGAC 118030 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 || | | || || | ||| || |||||| | |||||||| | ||||||||| Sbjct 118029 CAGCAAACTGTTGCGGACACCATGCTCCTTGATCTGCTCCTTGAGGCTGGCCCAGTCCCA 117970 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 | ||| | || | |||||||| |||||||| | || ||| | ||| Sbjct 117969 GAGATCCGTGGGGGTGACATTCCACATGTCGTACTGGAGGATACCCTGCGAGACAGGAGA 117910 Query 138741 GCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGC 138800 ||| ||||| | ||| ||| ||| | || |||| | || ||||| Sbjct 117909 GCCCTCGTAAGTGGAGTAAGGGCCATGCTCCTTGGCGCACTCCATAGAGGCAGTAAGCGC 117850 Query 138801 ACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTA 138860 | | | ||| || || ||| ||||||| |||||| || ||||||| |||| | Sbjct 117849 AGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTGTCTAGCCTCGGGAGACTCGAA 117790 Query 138861 CGGCATGCG--GAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGG 138918 |||||||| ||||| | || || ||||| || || || || || | |||| ||| Sbjct 117789 AGGCATGCGCAGAGCAAGG--AAGGCATCGGCGAGACCCTGAACACCGAGACCGATGGGG 117732 Query 138919 CGATGGCGCAGATTTGACGCTTTTGCGG----CTTCGATAGGATAATAGTTTACATCGAT 138974 || ||||||| || ||| |||||| | | | || || ||||| | ||| || Sbjct 117731 CGGTGGCGCATGTT----GCTGTTGCGGGCCTCCTGCACGGGGTAGTAGTTGATATCAAT 117676 Query 138975 GATTTTGTTTAAATTTCGCACGACCACCTTAGT--CGTATGCTTTAATCGT-TCAAAATC 139031 ||| ||||| | || || || | || || ||| | | | | | | || || Sbjct 117675 GATCTTGTTCAGGTTGCGAACAATGACACGGGTAACGT---CGTGGAGCTTCTGGAAGTC 117619 Query 139032 GTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTAT 139091 ||| | || |||||| ||| |||| | | | || || || || | Sbjct 117618 GTAGACGGCCTCGTTGTAGTCAACGAACTGGGGCA-------GAGCCAGG--GAAGCCAA 117568 Query 139092 GTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACT 139151 ||||| || || || || |||||| | ||| |||| || || | || | || Sbjct 117567 ATTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATGATCTCAGTGCAGAGGTTGGA 117508 Query 139152 ACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAG 139211 | ||| || || || || | || ||||| || ||||| |||||| ||||| || Sbjct 117507 GCTGCGGATGGTTCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAG 117448 Query 139212 CATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGC 139271 ||| | || | || || || || | ||| | ||| | ||| | | || Sbjct 117447 CATGAAAGGGTTACCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCACAGCTTCTGGGC 117388 Query 139272 -TTG-TATT-TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA 139328 ||| | || ||||| | | | | ||| ||||||||| ||||| || | ||||| Sbjct 117387 CTTGATCTTCTGACGACC---ACGACCCTCGGCCTCGTACTTCTCGTACAGAGCCTCGAA 117331 Query 139329 -TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATA 139387 |||| | ||||| | || | || | | |||| || ||||||||||| | ||| Sbjct 117330 CTCGT-CGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAGTCCACT 117272 Query 139388 CGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAAT 139447 |||||||| || ||| ||| |||||||||| || |||||||| | |||| | | || Sbjct 117271 CGCCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGAAGAGAT 117212 Query 139448 CGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAAAAC 139505 | || || | || ||| || ||| || | | || ||||| ||||| || Sbjct 117211 CACGGGCACGGATCTCCTCCTTGCCGTGGTTC--TTGCGGAGGTCGAGGAACTCAAAGAC 117154 Query 139506 GTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TTTCCGTTTGCCACCTTG 139562 || |||||||| || || || || ||||| | ||||| | || ||||| || || Sbjct 117153 ATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCCGCCCTG 117094 Query 139563 ATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGT 139622 ||||||| || ||| || ||||| || |||| ||| || | | ||| | | || Sbjct 117093 GTCGACGTATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGTTGGAGGT 117034 Query 139623 TCCGTTGGTGCTACGG--ATG--GGACTGTTGCGAGCTCGGACGTCATGTACATTGATGC 139678 |||||||||| ||| ||| ||| | | ||| |||| | || | || | | Sbjct 117033 ACCGTTGGTGC--CGGCAATGTAGGA--GCCGGTAGCACGGATGCGGTGGATGTTCAGAC 116978 Query 139679 CGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCT 139737 | || || || | | ||||| || | | || || | | || || || || || Sbjct 116977 CAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGA-GTGTCATAGATGCCG 116919 Query 139738 CTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTG 139797 ||||| || |||| ||| ||| || ||||| |||||||| || | | || Sbjct 116918 TCAATGCTATCATCCTTCATGTCGACAAGGAAGCAGGACGAAAGCTGAGCCTGGGGAGTA 116859 Query 139798 CCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAAC-ATTTGTTTCGACATCAATTCGTA 139856 || || ||||| || ||| || || ||||| | ||| || ||||| | | ||| Sbjct 116858 CCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAAGTACTTGCTT-GACATGAGGTTGTA 116800 Query 139857 CGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCAT 139916 || || ||| | | | |||| || |||||||| |||||||| || ||||| | ||| Sbjct 116799 AGTCTCAATGACACGCTCAATGTCGTCGCCGTGGATGCCGACAGACACACGCATGATCAT 116740 Query 139917 ATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGT 139976 || ||| || ||| | | | ||| | || || ||| || | ||| ||||| Sbjct 116739 GTGCTGGGGACGCTCGACGATCTTGCCGTTGAGCTTGAGCAGGTATGAGCGCTCGAGGGT 116680 Query 139977 CTTGTAGCCAAAGTACCTATAGTTGAAATCG 140007 |||| ||||||||||| |||||||| ||| Sbjct 116679 CTTGAAGCCAAAGTACTGGTAGTTGAAGTCG 116649 >seq9 Length=1091098 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || ||||| || || | || Sbjct 140572 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCC 140631 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 140632 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 140691 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| || ||||| |||||| | | | || || || ||| Sbjct 140692 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCGGACTACAAC 140751 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || || ||||| ||||| || ||| | ||| || || |||| || || || Sbjct 140752 ATCCAGAAGGAGTCGACCCTCCACCTCGTGCTGAGACTGCGTGGTGGTGG 140801 >seq25 Length=380168 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | ||||| || || ||||| || || || || | || Sbjct 211728 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACTCTTGAGGTCGAGTCGTCC 211787 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || ||||||||||| Sbjct 211788 GATACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCTCCCGATCAG 211847 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | |||||||| || || ||||| |||||| | | | |||| || || ||| Sbjct 211848 CAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGTACCTTGTCTGACTACAAC 211907 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || || | || | || ||||||| || Sbjct 211908 ATCCAGAAGGAGTCTACTCTCCATCTCGTCCTCCGTCTGCGCGGTGG 211954 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || || | Sbjct 211500 ATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCG 211559 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||||||||| Sbjct 211560 GACACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCTCCCGATCAG 211619 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| || || || ||||| ||||| |||| | || || || ||| Sbjct 211620 CAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGAAGAACACTCTCCGACTACAAC 211679 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || ||| | || | || | ||||| || Sbjct 211680 ATCCAGAAGGAGTCCACTCTCCACCTCGTCCTCCGTCTCCGCGGTGG 211726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896627096440