Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq3 113 4e-20 >seq3 Length=3980562 Score = 113 bits (124), Expect = 4e-20 Identities = 228/333 (68%), Gaps = 14/333 (4%) Strand=Plus/Minus Query 34318 TCAGTCTCCGGGTTGT--CACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAA 34375 || ||||| ||||| | ||| ||| | | | ||| |||||| |||||| ||||| | Sbjct 2117914 TCGGTCTCAGGGTTCTTGCACTTTCTGCAGAGAACG--AACTTGTTGATGAAGCCATCGA 2117857 Query 34376 GCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGT 34435 | |||||| | |||| | ||| || | |||||||| ||| | || |||| | Sbjct 2117856 GGTAGTCCTGAAGCTTAGTTGCGTCATGAGCGCCGTTGATGATCCAACGGTCGTCAGCGG 2117797 Query 34436 AATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCG 34495 ||||| | || || || || |||||| | ||||||||||| | || ||| | Sbjct 2117796 GATCGATGTTGGTCTGAGCCCCAAGCTCGAAACCGAAGTACTTGATGACATA---GGCAG 2117740 Query 34496 GACGTC---CAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGT 34552 || | | | | | || ||||| | || |||||||| ||| ||||||||||||| Sbjct 2117739 GAGGGCGGGCCAAAGACTGGGCGACGCTGCTCAAGTTGACGACGACGGTCTTGATGCCGT 2117680 Query 34553 TGCCCTTTCCTTCGACCTTGG--CGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTC 34610 | || || ||||| | ||||| |||| | | | ||| |||||||||||||| ||||| Sbjct 2117679 TACCTTTGCCTTCAATCTTGGTCTGCAGCTTCTC--CATCTTGTAGCGGTAGAAGGCGTC 2117622 Query 34611 CGCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 | |||| ||| |||||| || || |||| Sbjct 2117621 GGTGACATCGCGACGAACGTTGACGGTAGCCAT 2117589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840729549289