Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq9 132 3e-26
seq25 118 7e-22
seq5 86.0 4e-12
>seq9
Length=1091098
Score = 132 bits (146), Expect = 3e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
||||| || ||||| | ||| ||||||||| ||||| |||||||| || |||| ||
Sbjct 140786 CTCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCA 140727
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| || || ||||| ||||||||||| || || |||||||| | || | |||||||||
Sbjct 140726 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 140667
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || |||||| | || | || | ||| || || | ||| ||
Sbjct 140666 TCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGACGACTCCACCTCGAGGGTGATA 140607
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
||||| ||||| |||||||| || ||||||||||||||
Sbjct 140606 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATGAT 140569
>seq25
Length=380168
Score = 118 bits (130), Expect = 7e-22
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| ||||||||| ||||| ||||| || || | | | ||
Sbjct 211711 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTTCTTCCGTCC 211652
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || |||||||| || || ||||| || | || | |||||||||||
Sbjct 211651 TCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCC 211592
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || || |||||| |||| || ||||||
Sbjct 211591 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTC 211532
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
|| ||||| |||||||| || ||||||||||||||
Sbjct 211531 TTGCCCGTCAGGGTCTTGACGAAGATCTGCATGAT 211497
Score = 107 bits (118), Expect = 1e-18
Identities = 153/213 (72%), Gaps = 8/213 (4%)
Strand=Plus/Minus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||||||| | ||| ||||||||| ||||| ||||| ||| |||| |||| |||
Sbjct 212164 ACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCC 212105
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
| ||||| || |||||||| || || |||||||| | || | ||||||||||| |
Sbjct 212104 AACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 212045
Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGT 34944
|| || || || || ||||||| || | ||| || || | || |||||
Sbjct 212044 ATCTTGGACTTCAC--AT--TATCGATGGTGTCGGAAGACTCCACCTCCAGAGTGATGGT 211989
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| ||||| ||||| || |||||||||||
Sbjct 211988 CTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| ||||| || | | | || |||| || || ||||| || || ||
Sbjct 211919 CTCCTTCTGGATGTTGTAGTCAGACAAGGTACGGCCATCCTCGAGCTGCTTGCCAGCAAA 211860
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||| || || ||||| || | || | ||||||||||| | || || ||||||
Sbjct 211859 GATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTT 211800
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| || | || | |||||| |||| || |||||||| || || | |||||| ||
Sbjct 211799 GTCGATGGTATCGGACGACTCGACCTCAAGAGTAATGGTCTTGCCGGTCAAGGTCTTGAC 211740
Query 34966 AAAGATCTGCAT 34977
|||||||||||
Sbjct 211739 GAAGATCTGCAT 211728
Score = 89.7 bits (98), Expect = 3e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | || ||||||||| ||||| ||||| || |||| ||||
Sbjct 212395 AGGACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCT 212336
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || || ||||| || || ||||| || | || | |||||||||||
Sbjct 212335 TCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCC 212276
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | || || || | ||| ||||||
Sbjct 212275 TGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGATTCAACTTCCAGGGTGATGGTC 212216
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || ||||| ||||| || |||||
Sbjct 212215 TTGCCAGTAAGAGTCTTGACAAAAATTTGCAT 212184
>seq5
Length=2741173
Score = 86.0 bits (94), Expect = 4e-12
Identities = 132/186 (71%), Gaps = 8/186 (4%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || || | || | || || || ||||| ||||||||||
Sbjct 2268401 CCTTCTGGATGTTGTAGTCAGACAGAGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 2268342
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| || |||||||| | || | |||||||| || | || || ||||| ||
Sbjct 2268341 TCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGAC--AT- 2268285
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| || | ||| || |||| ||| || ||||| ||||| ||||||||
Sbjct 2268284 -TGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTC 2268226
Query 34964 ACAAAG 34969
|| |||
Sbjct 2268225 ACGAAG 2268220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692113297087
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |