Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq25 116 7e-21
>seq25
Length=380168
Score = 116 bits (128), Expect = 7e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | || ||| || || | || |||||||| || ||||| || || || ||||
Sbjct 211956 TACCACCGCGCAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAG 211897
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | || || || || || || ||||||||||| || | || ||||| ||||
Sbjct 211896 ACAAGGTACGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAG 211837
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760
| || || ||||| || || ||| ||||| || || || || || ||||| | ||
Sbjct 211836 GGATACCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCGATGGTATCGGACGACTCG 211778
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|| || | ||| || |||||||| ||||| ||||| || || |||||||||
Sbjct 211777 ACCTCAAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATT 211727
Score = 109 bits (120), Expect = 1e-18
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| || | || ||| || || | ||||| || || || ||||| || || || ||
Sbjct 212411 ACCACCACGCAGACGGAGGACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTAGTCGCT 212352
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
||| | | || ||||| || || || ||||||||||| || | || ||||| || ||
Sbjct 212351 CAGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGG 212292
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| || ||||| || |||||||| | || || || ||||| || || | ||| ||
Sbjct 212291 GATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGATTCAAC 212232
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || |||||||| || | ||||| ||||| || |||||
Sbjct 212231 TTCCAGGGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATTTGCAT 212184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981825023718647
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |