Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq25 114 3e-20
seq9 87.8 4e-12
seq1 87.8 4e-12
>seq25
Length=380168
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| ||||| || |||||| |||| ||||| ||| |||
Sbjct 211959 CAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACTCTGGAGGTGGAGTCTTCCGAC 212018
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || || ||| |||||| ||
Sbjct 212019 ACCATCGATAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 212078
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || |||||||| || ||||||||||||||||| | || || ||| |||||| ||
Sbjct 212079 CGCCTCATCTTCGCTGGCAAGCAGTTGGAAGATGGCCGCACCCTGAGCGACTACAACATC 212138
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| ||||| || | ||||| || ||| | || ||
Sbjct 212139 CAGAAGGAGTCAACCTTGCACCTGGTGTTGCGCCTGCG 212176
>seq9
Length=1091098
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| | || ||||| || ||||| ||||
Sbjct 140587 AAGACCCTGACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCCGACACTATCGACAAC 140646
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || ||| |||||| || | || ||||||
Sbjct 140647 GTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTCATCTTC 140706
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || ||||| | ||| | | || |||||| ||||||| |||||
Sbjct 140707 GCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCGGACTACAACATCCAGAAGGAGTCG 140766
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|| || ||||| || ||||||| ||
Sbjct 140767 ACCCTCCACCTCGTGCTGAGACTGCG 140792
>seq1
Length=4328376
Score = 87.8 bits (96), Expect = 4e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 101537 TCAGCCACCTTCCGGAGGTAATTGTGCCTCTTCTCCTTTCTTAATCTCTCGAAACGAAGG 101596
|| || ||||| |||| ||| ||||| | |||||||| ||| | | | |||||||||||
Sbjct 2774295 TCGGCGACCTTGCGGACGTAGTTGTGGCGCTTCTCCTCTCTGAGACGCGCGAAACGAAGG 2774236
Query 101597 GCAGATTGTCCTCCCCTCCCGTGTTTCTTTGGCAAAGAGACGTCAAAATTATGAAGAATT 101656
||||| || || || | ||||| ||||| |||| | ||| || || |||| |||
Sbjct 2774235 GCAGACTGACCACCACGGCCGTGCTTCTTGGGCAGATCAACGGAGAACTTGTGAACAATG 2774176
Query 101657 TTCTTGGTGTTCCCAGAGAGAGTCGCGAAAAGAGCA 101692
| |||||| || |||||| |||| ||||||
Sbjct 2774175 TCACGGGTGTTTCCGCTGAGAGTACCGAAGAGAGCA 2774140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181818180420333
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |