Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq25 114 3e-20 seq9 87.8 4e-12 seq1 87.8 4e-12 >seq25 Length=380168 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| ||||| || |||||| |||| ||||| ||| ||| Sbjct 211959 CAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACTCTGGAGGTGGAGTCTTCCGAC 212018 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || ||| |||||| || Sbjct 212019 ACCATCGATAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 212078 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || ||||||||||||||||| | || || ||| |||||| || Sbjct 212079 CGCCTCATCTTCGCTGGCAAGCAGTTGGAAGATGGCCGCACCCTGAGCGACTACAACATC 212138 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| || | ||||| || ||| | || || Sbjct 212139 CAGAAGGAGTCAACCTTGCACCTGGTGTTGCGCCTGCG 212176 >seq9 Length=1091098 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| | || ||||| || ||||| |||| Sbjct 140587 AAGACCCTGACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCCGACACTATCGACAAC 140646 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || ||| |||||| || | || |||||| Sbjct 140647 GTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTCATCTTC 140706 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | || ||||| | ||| | | || |||||| ||||||| ||||| Sbjct 140707 GCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCGGACTACAACATCCAGAAGGAGTCG 140766 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || || ||||| || ||||||| || Sbjct 140767 ACCCTCCACCTCGTGCTGAGACTGCG 140792 >seq1 Length=4328376 Score = 87.8 bits (96), Expect = 4e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 101537 TCAGCCACCTTCCGGAGGTAATTGTGCCTCTTCTCCTTTCTTAATCTCTCGAAACGAAGG 101596 || || ||||| |||| ||| ||||| | |||||||| ||| | | | ||||||||||| Sbjct 2774295 TCGGCGACCTTGCGGACGTAGTTGTGGCGCTTCTCCTCTCTGAGACGCGCGAAACGAAGG 2774236 Query 101597 GCAGATTGTCCTCCCCTCCCGTGTTTCTTTGGCAAAGAGACGTCAAAATTATGAAGAATT 101656 ||||| || || || | ||||| ||||| |||| | ||| || || |||| ||| Sbjct 2774235 GCAGACTGACCACCACGGCCGTGCTTCTTGGGCAGATCAACGGAGAACTTGTGAACAATG 2774176 Query 101657 TTCTTGGTGTTCCCAGAGAGAGTCGCGAAAAGAGCA 101692 | |||||| || |||||| |||| |||||| Sbjct 2774175 TCACGGGTGTTTCCGCTGAGAGTACCGAAGAGAGCA 2774140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181818180420333