Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3 163 4e-34 seq4 145 1e-28 seq22 132 7e-25 seq5 100 4e-15 seq1 89.7 7e-12 >seq3 Length=3980562 Score = 163 bits (180), Expect = 4e-34 Identities = 242/339 (71%), Gaps = 13/339 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||| || || ||||| ||||||||| |||| | Sbjct 2738607 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCATCTTTCTGGACTGCCGAGGAGATCGATC 2738665 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| | | | ||| || ||| | ||| Sbjct 2738666 TCTCCAAGGATCTCCACG----ACTGGAACAACAAGATCAACGAGGATGAGAAGTACTTC 2738721 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| |||| |||| ||||| || ||||||| || |||||||| ||||||||||| Sbjct 2738722 ATCTCGCACATCCTGGCCTTCTT-CGCCGCCTCGGACGGCATCGTCAACGAGAACCTGGT 2738780 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || ||||| | |||||||| | || ||||| || | || ||||| |||||||| Sbjct 2738781 CGAGCGCTTCAGCGGCGAGGTCCAGATTCCCGAGGCGCGCTGCTTCTACGGCTTCCAGAT 2738840 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || ||||||||||| || || ||||||||||||||||| Sbjct 2738841 CATGATGGAGAACATCCACTCCGAGACCTACTCGCTGCTCATTGACACCTACGTCAAGGA 2738900 Query 1456068 CCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACAC 1456106 || | | || | |||| | || |||||| ||||| Sbjct 2738901 GCCCGCCCAGCGGACCCACTTGTTCAACGCCATTGACAC 2738939 Score = 141 bits (156), Expect = 1e-27 Identities = 193/264 (73%), Gaps = 4/264 (2%) Strand=Plus/Plus Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577 || |||||||| |||| || ||| ||||||| | ||||| | | |||| | ||||| Sbjct 2739279 AGGAGATCATCATCGATGCTGTCAAGATCGAACAGGAGTTCCTTACCGAGGCTCTGCCCT 2739338 Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637 || || | ||||||||| | | | |||||| |||||||| || || |||||||| Sbjct 2739339 GCGCCCTGCTTGGCATGAACTCGAAC-CTCATGAAGCAGTACATCGAGTTC-GTCGCCGA 2739396 Query 1456638 CCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCAT 1456697 |||||| |||| || |||||| || ||||| |||||| | ||||||| || | Sbjct 2739397 CCGCCTCCTCGTCGCTCTCGGCAACG-AGAAGGTCTACCGTGCCACCAACCCCTTTGACT 2739455 Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGT 1456756 |||||| ||||| || | |||||||||||||| |||||| ||||| ||||||| Sbjct 2739456 TCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAGT 2739515 Query 1456757 ACGCCAAGGCCGGCGTCACCGCCA 1456780 || |||||||| |||| |||| Sbjct 2739516 ACCAGAAGGCCGGTGTCATGGCCA 2739539 Score = 105 bits (116), Expect = 1e-16 Identities = 118/154 (77%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 || |||||||||||||| ||||||||||| | | ||| || || ||| || ||| Sbjct 2739023 AAGAAGGCCGACTGGGCTCTGAAGTGGATCTCCGACC-GGGAGTCTAC-CTTCGCTCAGC 2739080 Query 1456183 GGCTCGTCGGCTTTGCCGCG-TCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCT 1456241 | ||| | | |||||| ||| ||||||| ||||| ||| || ||| | |||||| Sbjct 2739081 GCCTCATTGCCTTTGCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCT 2739140 Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 | ||||||||||||||||||||||||||||| || Sbjct 2739141 TCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCT 2739174 >seq4 Length=3265764 Score = 145 bits (160), Expect = 1e-28 Identities = 319/478 (67%), Gaps = 0/478 (0%) Strand=Plus/Plus Query 332852 TGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATG 332911 || ||||| ||||| ||| | | |||||||| || || || |||||| | |||||| Sbjct 2546371 TGCGCGTCCGTGAGCCGCGCGTACCGCAGGATCGCGCAGCGCGACTGCAGCGGCTCGATA 2546430 Query 332912 ACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATG 332971 | | | ||| |||||| || | || || |||||||| |||| | | ||||| Sbjct 2546431 ATCTTGTTGGACTGGTTGCACGCGAACGCGAAGCGCGTCGTGTTGGAGTAGATCTCCATC 2546490 Query 332972 GTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATG 333031 ||| ||| |||||||| || || | | || | || ||| |||||||||||||||| | Sbjct 2546491 GTCCGCCGCAGGGCCTGCTGCGCGCCAGAGGTCATGCTGTCAGCCTCGTCGAGGATGACG 2546550 Query 333032 ATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTG 333091 | |||||| || ||| |||||| || | ||| |||| ||||| || Sbjct 2546551 AGCTTGTGCCGGCCGGCCGGCAGTGTGACTTTCTTCTGGGCGAACCCCTTGATACGATTC 2546610 Query 333092 CGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCG 333151 || || ||||| | ||||||||||| |||||||| || || || || || | | | Sbjct 2546611 CGGACCACGTCGATACCGCGCTCGTCACTGGCGTTGAGCTCCAGGACTGCTTCCTTGTAG 2546670 Query 333152 GCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGC 333211 || | |||| || | |||||||||| | ||| || |||||||| | || ||| Sbjct 2546671 GCGTCGCCCAGTAGCTGTCTCGCCAGGCACAGCACGCTTGTTGTCTTGCCGATTCCCGGC 2546730 Query 333212 GGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCA 333271 || | | | || || ||||||||||| || ||| | |||||| | Sbjct 2546731 ATGCCTGATATGATGACGTGCGGCATGTTGCCATCCTTGGCGATGATCTTGAGTCGCTCG 2546790 Query 333272 ACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGATCC 333329 | | | | ||||||||| | ||||||||| | | ||| | ||||||||||| || Sbjct 2546791 ATTGTTTCCGTGTTGCCGACGACGTCGTCGAGGAAGACTGGTCTGTACTTTTCGACCC 2546848 Score = 95.1 bits (104), Expect = 2e-13 Identities = 151/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 165705 CCCGTGGCCGTCGAGTTTCTCAGTCCTC-TGGTGGCCCCCTATTTGGCAGACCTGGTCAC 165763 ||||| ||| |||| | || || |||| | | ||||| || | | ||||||||| | Sbjct 101102 CCCGTCGCCACCGAGATGCTGAG-CCTCATCGCGGCCCGGTACATCGACGACCTGGTCTC 101160 Query 165764 GTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGC 165823 |||| |||||| || |||||||||||||||||| ||||||||||| | ||| || Sbjct 101161 CGTGGGCTTCGTCGGCGCCCGCACCACCGAGAGCCAGCTGCACCGCGAGCTCGCGAGCGC 101220 Query 165824 GCTGC-CGCTGCCCATTGGCTTCAAAAACAGCACCGACGGC-AGCGTGGCGACGGCCCTC 165881 | ||| | ||| | |||||||| ||| | ||||||||| || ||| | || || Sbjct 101221 G-TGCGAATTTCCCGTGGGCTTCAAGAACGGGACCGACGGCTCGCTAGGC-CCAGCTGTC 101278 Query 165882 GATGCCGTGCGCACTGCCGCCCAGCCACA 165910 | ||||||||| | ||||| |||||| Sbjct 101279 AACGCCGTGCGCGCGGCCGCGGCGCCACA 101307 >seq22 Length=534521 Score = 132 bits (146), Expect = 7e-25 Identities = 333/505 (66%), Gaps = 17/505 (3%) Strand=Plus/Plus Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741 |||||||| | |||||| | ||||| ||| ||| ||||| |||| ||||||| Sbjct 116611 CACAAGGACGAGCTCGACTCGGCCATTGTGTACGACCGCGACTTCAACTACCAGTACTTT 116670 Query 259742 GGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGCGG 259801 || | |||| | || || |||||| ||| | || | |||||||||| Sbjct 116671 GGCTTCAAGACCCTCGAGCGCTCATACCTGCTCAAGCTCAACGGCAAGATCGTCGAGCGT 116730 Query 259802 CCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAAT 259861 |||||| | ||| |||||||||| | | ||| | || || ||||| | Sbjct 116731 CCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCCACGG---------CGACGACATT 116781 Query 259862 GCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCTCAGC 259920 | ||| || | | || ||| | |||||| |||| || ||||| || Sbjct 116782 G------AGCGTGTCATTGAGACTTACAACCTCATGTCA-AGCAAGTACTTCACACATGC 116834 Query 259921 GACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTT 259980 | ||||| || || || || || || || | | ||| |||||| ||||| || | Sbjct 116835 CTCTCCCACCCTGTTCAACGCTGGTACTCCCCAGGCTCAGCTTTCGTCCTGCTTCCTTGT 116894 Query 259981 GGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCAT 260040 |||||||||| ||| || || |||||||||||||| |||||| || || | || Sbjct 116895 CGACATGAAGGATGATAGCATTGACGGCATCTATGACACTCTCAAGACCTGTGCCATGAT 116954 Query 260041 CTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTA 260100 ||||||| ||| || || || ||| | | ||| | || || | ||| |||| Sbjct 116955 CTCCAAGATGGCTGGTGGTATTGGTCTGAACATCCACCGCATCCGTGCTACCGGCTCCTA 117014 Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160 | | || ||||||||||| ||||||||| |||| |||||||| || || || ||| | Sbjct 117015 CATTGCCGGCACCAACGGTACCTCCAACGGCATTGTTCCCATGCTGCGTGTCTTCAACAA 117074 Query 260161 CACGGCGCGCTACGTCGACCAGTGC 260185 ||| || | |||||||||||| || Sbjct 117075 CACTGCCAGATACGTCGACCAGGGC 117099 >seq5 Length=2741173 Score = 100 bits (110), Expect = 4e-15 Identities = 81/98 (83%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 165767 GGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCT 165826 |||||| ||||| ||||| ||||||||||||||| ||||||||||| | || || | || Sbjct 1073345 GGGCGCTGTCGGCGCGCGGACCACCGAGAGCCAGCTGCACCGCGAGCTCGCTTCTGGTCT 1073404 Query 165827 GCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA 165864 | | | ||| |||||||||| ||| |||||||||||| Sbjct 1073405 GTCTTTCCCCGTTGGCTTCAAGAACGGCACCGACGGCA 1073442 >seq1 Length=4328376 Score = 89.7 bits (98), Expect = 7e-12 Identities = 103/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827 |||||| ||||||| |||||||||||| ||| | ||||||||| | ||||| | ||| Sbjct 2844055 GGCGCCATCGGTGCCCGCACCACCGAGTCGCAGCTCCACCGCGAGCTCGCGTCCGGCCTG 2844114 Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGT-GGCGACGGCCCTCGATGC 165886 | | ||||| |||||||| || |||||||||||||| | || | | || | || || Sbjct 2844115 TCCTTCCCCATCGGCTTCAAGAATGGCACCGACGGCAGCCTCGGTGTC-GCTATTGACGC 2844173 Query 165887 CGTGCGCACTGCCGCC 165902 | | || |||||||| Sbjct 2844174 CATTGGCGCTGCCGCC 2844189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177794513832026