Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq25 131 2e-25
seq9 116 3e-21
seq5 102 7e-17
>seq25
Length=380168
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | |||||||| || || || |||||| || |||||||| ||| |
Sbjct 212182 CCACCACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 212123
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | || |||| |||||| || || || || | ||||||||||||| |||
Sbjct 212122 AGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 212063
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||||||| |||||| ||||| | | | | |||||| || ||||||
Sbjct 212062 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAGACTCCACC 212003
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| ||||| || || || || | ||| || || || ||||||||
Sbjct 212002 TCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956
Score = 102 bits (112), Expect = 7e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||| || || || | || |||||||||||||| |||||
Sbjct 212375 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAA 212316
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | |||||||| |||| || | || |||||||||| ||||| ||| | ||
Sbjct 212315 GATAAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGT 212257
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | ||||| |||||| || |||| ||||| || || || || | ||| || |
Sbjct 212256 TGTCAATGGTGTCCGACGATTCAACTTCCAGGGTGATGGTCTTGCCAGTAAGAGTCTTGA 212197
Query 35724 CAAATATCTGCAT 35736
|||| || |||||
Sbjct 212196 CAAAAATTTGCAT 212184
>seq9
Length=1091098
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | |||| ||| | || | || |||||| || |||||||| || |
Sbjct 140798 CCACCACGCAGTCTCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 140739
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || |||||||| || || || || | ||||||||||||| |||
Sbjct 140738 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 140679
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| || |||||||||| |||||| ||| | |||| | | |||||| ||| |||||
Sbjct 140678 ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATAGTGTCGGACGACTCCAC 140620
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||| || || ||||||| || ||||| || ||||||||
Sbjct 140619 CTCGAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 140572
>seq5
Length=2741173
Score = 102 bits (112), Expect = 7e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || |||||||| || | || || || |||| || |||||||| || || || |
Sbjct 2268401 CCTTCTGGATGTTGTAGTCAGACAGAGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 2268342
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
||| ||||||||||||| || | || |||||| ||| |||||| ||| | | |
Sbjct 2268341 TCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 2268282
Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726
| | |||||| ||| |||||||| | ||||| || || ||||||| || ||||| |
Sbjct 2268281 CGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 2268222
Query 35727 A 35727
|
Sbjct 2268221 A 2268221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450792625158840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |