Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq22 141 1e-28 >seq22 Length=534521 Score = 141 bits (156), Expect = 1e-28 Identities = 462/714 (65%), Gaps = 4/714 (1%) Strand=Plus/Minus Query 69505 GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGA 69564 ||| | |||| ||||| || || || | ||||| | | ||||| || || || ||| Sbjct 117345 GTACAGAGCC--TCGAACTCGTCGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGA 117288 Query 69565 CACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAA 69624 ||||| | | |||| | | | | || || || ||||| || || ||||||||||| Sbjct 117287 CACATGAGAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAG 117228 Query 69625 AGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCG 69684 || || | |||||||| | || | | || || || || || || || ||| Sbjct 117227 AGGGCGAGGAAGAGATCACGGGCACGGATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCG 117168 Query 69685 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGT 69744 || ||||| | | ||| | ||||| || || || || || || | | || |||| Sbjct 117167 AGGAACTCAAAGACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTC 117108 Query 69745 TTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATA 69804 || || || ||||| || | ||||||||||||||| || |||| | |||||| |||| | Sbjct 117107 TTGTTGCCGCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACA 117048 Query 69805 ATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTA 69864 || || || || |||| || || || | ||| || || | || || || Sbjct 117047 ATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCGGTAGCACGGATGCGGTGG 116988 Query 69865 ATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCA 69924 || ||||| || || || ||||| || ||||| | ||||| || | |||||| Sbjct 116987 ATGTTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCA 116928 Query 69925 TATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 69984 || || || || ||||||||||| |||||| | ||| || ||| || | ||| Sbjct 116927 TAGATGCCGTCAATGCTATCATCCTTCATGTCGACAAGGAAGCAGGACGAAAGCTGAGCC 116868 Query 69985 TGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGC 70044 || ||| || || || || | || ||||| || || ||||| | || || | Sbjct 116867 TGGGGAGTACCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAAGTACTTGCTTGACATG 116808 Query 70045 AGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACG 70103 || ||||| || ||||| | || || || | | | || || || | | ||||| Sbjct 116807 AGGTTGTAAGTCTCAATGACACGCTCAATGTCGTCGCCG-TGGATGCCGACAGACACACG 116749 Query 70104 CATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTT 70163 ||| | ||| ||||| || || || || | || || | || | ||||||||| Sbjct 116748 CATGATCATGTGCTGGGGACGCTCGACGATCTTGCCGTTGAGCTTGAGCAGGTATGAGCG 116689 Query 70164 TTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 || || || || || ||||| || | ||| ||||| | ||||| | ||| Sbjct 116688 CTCGAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTACACAAT 116635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907314559720