Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq25 114 1e-20
seq9 95.1 1e-14
>seq25
Length=380168
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| || | |||| || || || || || || || || ||||||||||||
Sbjct 212410 CCACCACGCAGACGGAGGACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTAGTCGCTC 212351
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | ||||| ||||| ||||| || | || |||||||| |||||||| ||
Sbjct 212350 AGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGGG 212291
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| || || |||||| || | | | || | ||||| | | |||||||
Sbjct 212290 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGATTCAACT 212231
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || | ||||| || ||||| || ||||| |||||||||
Sbjct 212230 TCCAGGGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATTTGCATA 212183
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| ||||| |||| || || || || || || || || ||||||||||||
Sbjct 212182 CCACCACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 212123
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | |||| | ||||| | ||| || || ||| | ||||| ||||| || ||||| ||
Sbjct 212122 AGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 212063
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| || || ||||||| |||| | || | ||||| | | || ||
Sbjct 212062 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAGACTCCACC 212003
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| ||||| || | || || || ||||| || || ||||| ||||||
Sbjct 212002 TCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCATA 211955
Score = 98.7 bits (108), Expect = 8e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCA-TGTTGCGCTCGTCTTCGAGCTGTTTACC 27109
|| || || || || || ||||||||| | |||| | |||| |||||||| || ||
Sbjct 211696 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTTCTTC-CGTCCTCGAGCTGCTTGCC 211638
Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169
||| | ||||| ||||| ||||| || || | |||||| || || ||||||| | ||
Sbjct 211637 AGCGAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATCTTGCTCTT 211578
Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229
| | | || | ||||| | || || || || ||||| || | ||||||||||| ||
Sbjct 211577 GACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTCAGGGT 211518
Query 27230 TTTCACAAAGATTTGCAT 27247
|| || ||||| |||||
Sbjct 211517 CTTGACGAAGATCTGCAT 211500
>seq9
Length=1091098
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || |||||||| | |||| | || |||||||| || |||
Sbjct 140768 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCG 140709
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | ||||| ||||| || ||||| || | ||||| || || ||||||| ||
Sbjct 140708 GCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 140649
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | |||||| | | || || || || || |||| ||||||||||| ||
Sbjct 140648 ACGTTGTCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTCAGGGTC 140589
Query 27231 TTCACAAAGATTTGCAT 27247
||||| ||||| |||||
Sbjct 140588 TTCACGAAGATCTGCAT 140572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933504052376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |