Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq25 114 1e-20 seq9 95.1 1e-14 >seq25 Length=380168 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | |||| || || || || || || || || |||||||||||| Sbjct 212410 CCACCACGCAGACGGAGGACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTAGTCGCTC 212351 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||| ||||| ||||| || | || |||||||| |||||||| || Sbjct 212350 AGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGGG 212291 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | | || | ||||| | | ||||||| Sbjct 212290 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGATTCAACT 212231 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| || ||||| || ||||| ||||||||| Sbjct 212230 TCCAGGGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATTTGCATA 212183 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| ||||| |||| || || || || || || || || |||||||||||| Sbjct 212182 CCACCACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 212123 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | ||||| | ||| || || ||| | ||||| ||||| || ||||| || Sbjct 212122 AGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 212063 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| |||| | || | ||||| | | || || Sbjct 212062 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAGACTCCACC 212003 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || | || || || ||||| || || ||||| |||||| Sbjct 212002 TCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCATA 211955 Score = 98.7 bits (108), Expect = 8e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCA-TGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || || || || || ||||||||| | |||| | |||| |||||||| || || Sbjct 211696 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTTCTTC-CGTCCTCGAGCTGCTTGCC 211638 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | ||||| ||||| ||||| || || | |||||| || || ||||||| | || Sbjct 211637 AGCGAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATCTTGCTCTT 211578 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | || | ||||| | || || || || ||||| || | ||||||||||| || Sbjct 211577 GACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTCAGGGT 211518 Query 27230 TTTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 211517 CTTGACGAAGATCTGCAT 211500 >seq9 Length=1091098 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| | |||| | || |||||||| || ||| Sbjct 140768 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCG 140709 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||| ||||| || ||||| || | ||||| || || ||||||| || Sbjct 140708 GCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 140649 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| | | || || || || || |||| ||||||||||| || Sbjct 140648 ACGTTGTCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTCAGGGTC 140589 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 140588 TTCACGAAGATCTGCAT 140572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933504052376