Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq22 199 5e-46 seq3 96.9 4e-15 seq4 93.3 5e-14 >seq22 Length=534521 Score = 199 bits (220), Expect = 5e-46 Identities = 1107/1745 (63%), Gaps = 45/1745 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| || |||||||| || |||||||| || | ||||| || Sbjct 118454 CGAAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGTGAAGTGCATGCTGGTG 118395 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | |||| | || || | |||| || ||||| | ||||| ||||| || || Sbjct 118394 ATCTTGCCCATTGTGGGGTCCTTCATGTGGATGTTCAGAGACTGGGACTGATCAATAAAA 118335 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGTC 118013 || || || || ||||| | ||| | || ||| ||| ||||| || ||| Sbjct 118334 GCACCGCGGTCGGCAGCCATTTG---CACGACTGTCCTCTGAGAGATCTCCCAGACGGTC 118278 Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073 ||||||| ||| | ||| | ||||| | ||| || || | || || ||| | Sbjct 118277 TTGTAGAGAGCCTTGACATCGGCGGGGATGTTGGGGATGTTCTGAACAGAACCGCCCTCG 118218 Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 118133 | ||| | | |||||| | ||||||||||| || | || |||| | | Sbjct 118217 GCAATGATGCGGTTCTTCATGCTGTCAGACCAGAGACCCATGTCGACAAGGTCCTTGAGG 118158 Query 118134 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 118193 || ||||| || || ||||| ||||| || | | ||||| || | Sbjct 118157 AGCCAAGGGTTGACGACCTGGAAGTCACCTGCGAGCACACGACGCGAGTAGATGTTTGAG 118098 Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 ||||| |||||||||||||| ||||| || | || |||| || ||| || |||||| Sbjct 118097 GTGTAAGGCTCAAAGCACTCGTTGTTGCCGAGAATCTGGGAGGTACTGGCAGTAGGCATG 118038 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCC 118313 || || | || | ||||| |||| ||| | ||| | || | |||||||| | || Sbjct 118037 GGGGCGACCAGCAAACTGTTGCGGACACCATGCTCCTTGATCTGCTCCTTGAGGCTGGCC 117978 Query 118314 CAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAC 118373 ||||| || | | | | | |||||| || ||||||||||||| || || Sbjct 117977 CAGTCCCAGAGATCCGTGGGGGTGACATTCCACATGTCGTACTGGAGGATACCCTGCGAG 117918 Query 118374 GCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC-CAATTCGGAGCTCGC 118432 | || || ||||| | || || ||||| | ||| || || | | || || Sbjct 117917 ACAGGAGAGCCCTCGTAAGTGGAGTAAGGGCCATGCTCCTTGGCGCACTCCATAGAG-GC 117859 Query 118433 CTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGT 118491 || || ||||| || || || || || || | || | || || | ||||| Sbjct 117858 AGTAAGCGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTGTCTAG-CCTCGG 117800 Query 118492 CGGAATCAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGG 118550 || || || | | || || | || || |||| |||||||| || |||||||| Sbjct 117799 GAGACTCGAAAGGCATGCG-CAGAGCAAGGAAGGCATCGGCGAGACCCTGAACACCGAGA 117741 Query 118551 CCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTA 118610 || || ||||| || | ||| || || || || || |||||| || | || || Sbjct 117740 CCGATGGGGCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGCACGGGGTAGTAGTTGATA 117681 Query 118611 TCGATAACCCTATTTAGATTTTTGGTGACAA---CCTTTGTGATTTCATGAAGCTTTTCG 118667 || || | | | || || || | |||| | || | || || ||||| | | Sbjct 117680 TCAATGATCTTGTTCAGGTT---GCGAACAATGACACGGGTAACGTCGTGGAGCTTCTGG 117624 Query 118668 TAATCAAA-ACTGCGAGTCTCTTCATTGACAT---ACTTAGGAAGGGCGATTGACGCCAG 118723 | || | || || ||| | | | || ||| || || || | || |||| Sbjct 117623 AAGTCGTAGACGGC----CTCGTTGTAGTCAACGAACTGGGGCAGAGCCAGGGAAGCCAA 117568 Query 118724 ATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGA 118783 ||| || |||| | |||||| ||| |||||| || || || ||||| | ||| || Sbjct 117567 ATTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATGATCTCAGTGCAGAGGTTGGA 117508 Query 118784 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAG 118843 || ||||| ||||||||||| || || ||| ||| ||||||||||| || Sbjct 117507 GCTGCGGATGGTTCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAG 117448 Query 118844 CATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAG 118902 |||| | || | || ||||| || || | || ||| || || | ||| | | || | Sbjct 117447 CATGAAAGGGTTACCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCACAGCTTCTGGGC 117388 Query 118903 CTGGCACAG-TGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAAC 118961 || | | || || | || ||||| |||||||||| ||| || || || ||| Sbjct 117387 CTTGATCTTCTGACGAC--CACGACCCTCGGCCTCGTACTTCTCGTACAGAGCCTCGAAC 117330 Query 118962 TCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGA 119021 || || || | || | ||| || || || | || || | ||||| ||| | Sbjct 117329 TCGTCGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAGTCCACTCG 117270 Query 119022 CCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCC 119081 || || ||| || ||||||||||| ||||| || |||||||| || ||||||||| Sbjct 117269 CCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGAAGAGATCA 117210 Query 119082 CGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 119140 || || || || || | | || || || || | || | || || | || ||| Sbjct 117209 CGGGCACGGATCTCCTCCTTGCCG-TGGTTCTTGCGGAGGTCGAGGAACTCAAAGACATC 117151 Query 119141 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGACGACCAGCCTGGT 119196 ||||||||| || || ||||| | |||| | || || | | || |||||| Sbjct 117150 CGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTG-CCGCCCTGGT 117092 Query 119197 TTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGC 119256 || || || |||||| ||| || ||||| ||||| |||| || || | ||| | Sbjct 117091 CGACGTATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGTTGGAGGTAC 117032 Query 119257 CATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAAT 119314 | || || || ||| | ||| | | || | || |||||||| || |||||| Sbjct 117031 CGTTGGTGCCGGCAATGTAGGAGCCGG--TAGCACGGATGCGGTGGATGTTCAGACCAAT 116974 Query 119315 ACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGAT 119374 ||| || ||| ||| ||||| || || | ||||| || | ||||| || || || Sbjct 116973 ACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATGCCGTCAAT 116914 Query 119375 CGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGC 119434 ||| |||| | ||| ||||||||| ||| | |||| | ||| |||||||| Sbjct 116913 GCTATCATCCTTCATGTCGACAAGGAAGCAGGACGAAAGCTGAGCCTGGGGAGTACCAGC 116854 Query 119435 GTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTC 119492 |||||| || || || | || || |||| || |||| ||||| || ||| ||| Sbjct 116853 GTTGAACAGGGTGGGAGAGGCATGTGTGAA-GTA-CTTGCTTGACATGAGGTTGTAAGTC 116796 Query 119493 TCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTAT 119552 || | ||| |||||| || ||||| || |||| || || ||||| | ||||| Sbjct 116795 TCAATGACACGCTCAATGTCGTCGCCGTGGATGCCGACAGACACACGCATGATCATGTGC 116736 Query 119553 TGGGG 119557 ||||| Sbjct 116735 TGGGG 116731 >seq3 Length=3980562 Score = 96.9 bits (106), Expect = 4e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || |||||| ||||||||||| |||||||| || || |||||| || || Sbjct 2739229 GGCAAAGTCAGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGGCC 2739170 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 |||||||| || |||||||| | |||||| || | || | || ||||||||| Sbjct 2739169 GGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGAT 2739110 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 ||||| || || || |||| ||| |||| ||| |||| Sbjct 2739109 ACCCTCGACCGCAGCAAAGGCAATGAGGCGCTGAGCGAAGG 2739069 >seq4 Length=3265764 Score = 93.3 bits (102), Expect = 5e-14 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 14243 GCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCAAAGATA 14302 |||||||| || |||||||| | || || || | | | || ||| | |||| Sbjct 589263 GCGTCAATCTCGTCGATGAAGATAATGCACGGCGCACTCTTGCGCGCATTGGCGAAGAGG 589204 Query 14303 TCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCG-GAACA 14361 || ||||||| |||||||||||| ||||||||||| || || | || | || || Sbjct 589203 TCACGCACTCGGGAGGCACCGACACCGACAAACATCTCTACGAACTCGGAGCCGCTGACG 589144 Query 14362 TTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGT 14421 | || |||||||||| ||| ||||| ||| | || ||| || | ||||| || || Sbjct 589143 CT-GAAGAAGGGGACGCCAGACTCACCGGCGGTAGCCTTGGCAAGCATAGTCTTACCAGT 589085 Query 14422 CCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 || ||| || ||||||| ||| || || |||||| |||| || Sbjct 589084 ACCGGGTGGTCCAGCGAGAATGGCGCCGCGGGGGATCTTGGCGCC 589040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433862633880