Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq22 298 6e-76 seq3 134 2e-26 seq4 84.2 3e-11 >seq22 Length=534521 Score = 298 bits (330), Expect = 6e-76 Identities = 917/1395 (66%), Gaps = 35/1395 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| ||| | |||| || || || || |||||||| |||| Sbjct 116731 CCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCCACGGCGACGACATTGAGCGTGTC 116790 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | ||||| ||| || ||||| |||| || |||| || || | || ||||| | Sbjct 116791 ATTGAGACTTACAACCTCATGTCAAGCAAG-TAC-TTCACACATGCCTCTCCCACCCTGT 116848 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| |||||||| || | || | || ||||||||| ||| || ||||| | Sbjct 116849 TCAACGCTGGTACTCCCCAGGCTCAGCTTTCGTCCTGCTTCCTTGTCGACATGAAGGATG 116908 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 | || |||| ||||||| ||||| | | ||||| ||||| ||| ||||| Sbjct 116909 ATAGCATTGACGGCATCTATGACACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTG 116968 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | |||||||| || ||||||| | | || | || ||| || || | Sbjct 116969 GTGGTATTGGTCTGAACATCCACCGCATCCGTGCTACCGGCTCCTACATTGCCGGCACCA 117028 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | ||| || | || ||| |||| ||||| || || || ||| ||| || | || | Sbjct 117029 ACGGTACCTCCAACGGCATTGTTCCCATGCTGCGTGTCTTCAACAACACTGCCAGATACG 117088 Query 104580 TAAATCAAGCTGGGCGTCGA-AAGGGATCTATCGCAGTC------TATCTTGAGCCATGG 104632 | | || ||||| | | ||| || || ||| || || || ||||| ||| Sbjct 117089 TCGACCA----GGGCGGCAACAAGAGACCTGGCGCTTTCGCCATTTACCTCGAGCCCTGG 117144 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 ||||||||| || | |||||||| || | || ||||| || | |||||| || Sbjct 117145 CACGCGGATGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGATCCGT 117204 Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 ||| ||||||||| ||| ||||||||||| || || ||||||||| | || ||| || Sbjct 117205 GCCCGTGATCTCTTCCTCGCCCTCTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAAG 117264 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | ||| | ||| ||||| | ||||| || || ||||| ||| |||||| || Sbjct 117265 AACGGCGAGTGGACTCTCATGTGTCCCAACGAGTGCCCTGGCCTCGCCGATGTGTACGGC 117324 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872 || ||||| || || || ||| |||||||||| || ||||| | | || | | Sbjct 117325 GACGAGTTCGAGGCTCTGTACGAGAAGTACGAGGCCGAGGGTCGTGGTCGTCAGAAGAT- 117383 Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 | || | || | ||||| | || || ||| || |||| || ||||| |||| || | Sbjct 117384 CAAGGCCCAGAAGCTGTGGTACGCCATCCTCGAGGCTCAGACTGAGACCGGTAACCCTTT 117443 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||||| ||||| || || |||| ||||| || || ||||| ||||| ||| Sbjct 117444 CATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACTTGGGAACCATCCG 117503 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 || ||||| ||||| || || ||| | || | | | | |||||| ||||| || Sbjct 117504 CAGCTCCAACCTCTGCACTGAGATCATCGAGTACTCTGCCCCCGATGAGGTCGCTGTCTG 117563 Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT--GAT 105109 || | || || | ||||| ||| ||| || || | | | || | | | | | || Sbjct 117564 CAATTTGGCTTCCCTGGCTCTGCCCCAGTTCGTTGA-CTACA-ACGAGGCCGTCTACGAC 117621 Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCA---CCAAAAACCTAAACAGAGTTATT 105166 | | || |||||||| ||||| ||||| ||||| |||| | ||| Sbjct 117622 TTCCAGAAGCTCCACGACGTTAC---CCGTGTCATTGTTCGCAACCTGAACAAGATCATT 117678 Query 105167 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 |||| || | |||||||| || || || || || ||| | ||||| || || Sbjct 117679 GATATCAACTACTACCCCGTGCAGGAGGCCCGCAACAGCAACATGCGCCACCGCCCCATC 117738 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTT-GATT 105284 ||||||||||||||||||||||| |||| ||| || || || || || || ||| || | Sbjct 117739 GGTCTCGGTGTTCAGGGTCTCGCCGATGCCTTCCTTGCTCTG-CG-CATGCCTTTCGAGT 117796 Query 105285 CCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344 | ||| || | | |||| || || || |||||||| || ||||| || ||| Sbjct 117797 CTCCCGAGGCTAGACAGCTCAACAAGCAGATCTTCGAGACCATCTACCACGCTGCGCTTA 117856 Query 105345 AGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404 || | |||| || ||| |||| || || || | ||||| ||||| | Sbjct 117857 CTGCCTCTATGGAGTGCGCCAAGGAGCATGGCCCTTACTCCACTTACGAGGGCTCTCCTG 117916 Query 105405 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA-GACCAAGCTTCACTACGAC 105463 || || || | || || | || |||| |||| || | ||| | || || ||| Sbjct 117917 TCTCGCAGGGTATCCTCCAGTACGACATGT-GGAATGTCACCCCCACGGATCTCTGGGAC 117975 Query 105464 TGGG-AAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGC 105522 |||| ||| |||||||| | ||||||||| | ||| | || |||||| | || | || Sbjct 117976 TGGGCCAGC-CTCAAGGAGCAGATCAAGGAGCATGGTGTCCGCAACAGTTTGCTGGTCGC 118034 Query 105523 TCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 105582 || ||||| || ||| ||| | || || | || || || || |||||||| || || Sbjct 118035 CCCCATGCCTACTGCCAGTACCTCCCAGATTCTCGGCAACAACGAGTGCTTTGAGCCTTA 118094 Query 105583 CACGACGAACATCTA 105597 ||| | |||||||| Sbjct 118095 CACCTCAAACATCTA 118109 >seq3 Length=3980562 Score = 134 bits (148), Expect = 2e-26 Identities = 156/209 (75%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 94750 AAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAG 94806 ||||| || || |||||| |||||||| | || |||| | |||| ||| || Sbjct 2739023 AAGAAGGCCGACTGGGCTCTGAAGTGGATCTCCGACCGGGAGTC---TACCTTCGCTCAG 2739079 Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 94866 || ||| | || ||||| || ||||||||||||||| ||| ||||| | | || Sbjct 2739080 CGCCTCATTGCCTTTGCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATC 2739139 Query 94867 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 94926 | |||||||||||||| || |||||||| || ||| ||||||||||||||| ||||| Sbjct 2739140 TTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCG 2739199 Query 94927 CGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||||||| |||||| || ||||| Sbjct 2739200 CGTGACGAGGGCCTCCACACTGACTTTGC 2739228 >seq4 Length=3265764 Score = 84.2 bits (92), Expect = 3e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763 || |||||||| || ||||||| ||||| || | | | ||| || | ||||| Sbjct 589263 GCGTCAATCTCGTCGATGAAGATAATGCACGGCGCACTCTTGCGCGCATTGGCGAAGAGG 589204 Query 9764 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 9822 || || || || ||| || ||||| ||||||||||| || || | | | || || Sbjct 589203 TCACGCACTCGGGAGGCACCGACACCGACAAACATCTCTACGAACTCGGAGCCGCTGACG 589144 Query 9823 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9882 || | ||||||||| ||| ||||| || | || ||| || | ||||||||| || Sbjct 589143 CTGAA-GAAGGGGACGCCAGACTCACCGGCGGTAGCCTTGGCAAGCATAGTCTTACCAGT 589085 Query 9883 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 ||| || || ||||| | ||| || || || ||||||||||| Sbjct 589084 ACCGGGTGGTCCAGCGAGAATGGCGCCGCGGGGGATCTTGGCGCC 589040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259538698520