Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq22 298 6e-76
seq3 134 2e-26
seq4 84.2 3e-11
>seq22
Length=534521
Score = 298 bits (330), Expect = 6e-76
Identities = 917/1395 (66%), Gaps = 35/1395 (3%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| ||||||| ||| | |||| || || || || |||||||| ||||
Sbjct 116731 CCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCCACGGCGACGACATTGAGCGTGTC 116790
Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339
| ||||| ||| || ||||| |||| || |||| || || | || ||||| |
Sbjct 116791 ATTGAGACTTACAACCTCATGTCAAGCAAG-TAC-TTCACACATGCCTCTCCCACCCTGT 116848
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||| |||||||| || | || | || ||||||||| ||| || ||||| |
Sbjct 116849 TCAACGCTGGTACTCCCCAGGCTCAGCTTTCGTCCTGCTTCCTTGTCGACATGAAGGATG 116908
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
| || |||| ||||||| ||||| | | ||||| ||||| ||| |||||
Sbjct 116909 ATAGCATTGACGGCATCTATGACACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTG 116968
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| |||||||| || ||||||| | | || | || ||| || || |
Sbjct 116969 GTGGTATTGGTCTGAACATCCACCGCATCCGTGCTACCGGCTCCTACATTGCCGGCACCA 117028
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
| ||| || | || ||| |||| ||||| || || || ||| ||| || | || |
Sbjct 117029 ACGGTACCTCCAACGGCATTGTTCCCATGCTGCGTGTCTTCAACAACACTGCCAGATACG 117088
Query 104580 TAAATCAAGCTGGGCGTCGA-AAGGGATCTATCGCAGTC------TATCTTGAGCCATGG 104632
| | || ||||| | | ||| || || ||| || || || ||||| |||
Sbjct 117089 TCGACCA----GGGCGGCAACAAGAGACCTGGCGCTTTCGCCATTTACCTCGAGCCCTGG 117144
Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692
||||||||| || | |||||||| || | || ||||| || | |||||| ||
Sbjct 117145 CACGCGGATGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGATCCGT 117204
Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
||| ||||||||| ||| ||||||||||| || || ||||||||| | || ||| ||
Sbjct 117205 GCCCGTGATCTCTTCCTCGCCCTCTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAAG 117264
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
| ||| | ||| ||||| | ||||| || || ||||| ||| |||||| ||
Sbjct 117265 AACGGCGAGTGGACTCTCATGTGTCCCAACGAGTGCCCTGGCCTCGCCGATGTGTACGGC 117324
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872
|| ||||| || || || ||| |||||||||| || ||||| | | || | |
Sbjct 117325 GACGAGTTCGAGGCTCTGTACGAGAAGTACGAGGCCGAGGGTCGTGGTCGTCAGAAGAT- 117383
Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931
| || | || | ||||| | || || ||| || |||| || ||||| |||| || |
Sbjct 117384 CAAGGCCCAGAAGCTGTGGTACGCCATCCTCGAGGCTCAGACTGAGACCGGTAACCCTTT 117443
Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991
|||||| ||||| || || |||| ||||| || || ||||| ||||| |||
Sbjct 117444 CATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACTTGGGAACCATCCG 117503
Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051
|| ||||| ||||| || || ||| | || | | | | |||||| ||||| ||
Sbjct 117504 CAGCTCCAACCTCTGCACTGAGATCATCGAGTACTCTGCCCCCGATGAGGTCGCTGTCTG 117563
Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT--GAT 105109
|| | || || | ||||| ||| ||| || || | | | || | | | | | ||
Sbjct 117564 CAATTTGGCTTCCCTGGCTCTGCCCCAGTTCGTTGA-CTACA-ACGAGGCCGTCTACGAC 117621
Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCA---CCAAAAACCTAAACAGAGTTATT 105166
| | || |||||||| ||||| ||||| ||||| |||| | |||
Sbjct 117622 TTCCAGAAGCTCCACGACGTTAC---CCGTGTCATTGTTCGCAACCTGAACAAGATCATT 117678
Query 105167 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226
|||| || | |||||||| || || || || || ||| | ||||| || ||
Sbjct 117679 GATATCAACTACTACCCCGTGCAGGAGGCCCGCAACAGCAACATGCGCCACCGCCCCATC 117738
Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTT-GATT 105284
||||||||||||||||||||||| |||| ||| || || || || || || ||| || |
Sbjct 117739 GGTCTCGGTGTTCAGGGTCTCGCCGATGCCTTCCTTGCTCTG-CG-CATGCCTTTCGAGT 117796
Query 105285 CCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344
| ||| || | | |||| || || || |||||||| || ||||| || |||
Sbjct 117797 CTCCCGAGGCTAGACAGCTCAACAAGCAGATCTTCGAGACCATCTACCACGCTGCGCTTA 117856
Query 105345 AGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404
|| | |||| || ||| |||| || || || | ||||| ||||| |
Sbjct 117857 CTGCCTCTATGGAGTGCGCCAAGGAGCATGGCCCTTACTCCACTTACGAGGGCTCTCCTG 117916
Query 105405 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA-GACCAAGCTTCACTACGAC 105463
|| || || | || || | || |||| |||| || | ||| | || || |||
Sbjct 117917 TCTCGCAGGGTATCCTCCAGTACGACATGT-GGAATGTCACCCCCACGGATCTCTGGGAC 117975
Query 105464 TGGG-AAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGC 105522
|||| ||| |||||||| | ||||||||| | ||| | || |||||| | || | ||
Sbjct 117976 TGGGCCAGC-CTCAAGGAGCAGATCAAGGAGCATGGTGTCCGCAACAGTTTGCTGGTCGC 118034
Query 105523 TCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 105582
|| ||||| || ||| ||| | || || | || || || || |||||||| || ||
Sbjct 118035 CCCCATGCCTACTGCCAGTACCTCCCAGATTCTCGGCAACAACGAGTGCTTTGAGCCTTA 118094
Query 105583 CACGACGAACATCTA 105597
||| | ||||||||
Sbjct 118095 CACCTCAAACATCTA 118109
>seq3
Length=3980562
Score = 134 bits (148), Expect = 2e-26
Identities = 156/209 (75%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 94750 AAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAG 94806
||||| || || |||||| |||||||| | || |||| | |||| ||| ||
Sbjct 2739023 AAGAAGGCCGACTGGGCTCTGAAGTGGATCTCCGACCGGGAGTC---TACCTTCGCTCAG 2739079
Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 94866
|| ||| | || ||||| || ||||||||||||||| ||| ||||| | | ||
Sbjct 2739080 CGCCTCATTGCCTTTGCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATC 2739139
Query 94867 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 94926
| |||||||||||||| || |||||||| || ||| ||||||||||||||| |||||
Sbjct 2739140 TTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCG 2739199
Query 94927 CGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||||||||||| |||||| || |||||
Sbjct 2739200 CGTGACGAGGGCCTCCACACTGACTTTGC 2739228
>seq4
Length=3265764
Score = 84.2 bits (92), Expect = 3e-11
Identities = 155/225 (69%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763
|| |||||||| || ||||||| ||||| || | | | ||| || | |||||
Sbjct 589263 GCGTCAATCTCGTCGATGAAGATAATGCACGGCGCACTCTTGCGCGCATTGGCGAAGAGG 589204
Query 9764 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 9822
|| || || || ||| || ||||| ||||||||||| || || | | | || ||
Sbjct 589203 TCACGCACTCGGGAGGCACCGACACCGACAAACATCTCTACGAACTCGGAGCCGCTGACG 589144
Query 9823 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9882
|| | ||||||||| ||| ||||| || | || ||| || | ||||||||| ||
Sbjct 589143 CTGAA-GAAGGGGACGCCAGACTCACCGGCGGTAGCCTTGGCAAGCATAGTCTTACCAGT 589085
Query 9883 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
||| || || ||||| | ||| || || || |||||||||||
Sbjct 589084 ACCGGGTGGTCCAGCGAGAATGGCGCCGCGGGGGATCTTGGCGCC 589040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259538698520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |