Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq25 143 8e-29
seq1 123 8e-23
>seq25
Length=380168
Score = 143 bits (158), Expect = 8e-29
Identities = 173/233 (74%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | | || || ||||| ||||||||||| || || || || || ||
Sbjct 211958 CATACCACCGCGCAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 211899
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| || || || ||||| || || || || ||||||||||| || || |||||||| ||
Sbjct 211898 AGACAAGGTACGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGG 211839
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
||| || || || || ||||| || || ||| || || || || || | ||| || | |
Sbjct 211838 AGGGATACCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTATCGGACGACT 211780
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
| || ||||| |||| ||||| ||||| | || || || || |||||||||
Sbjct 211779 CGACCTCAAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATT 211727
Score = 125 bits (138), Expect = 2e-23
Identities = 168/234 (72%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563
|||| ||||||||| | | || || || || | || ||||| || || || || ||
Sbjct 212417 TTACTGACCACCACGCAGACGGAGGACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTA 212358
Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623
|| | || || |||||||| || || || ||||||||||| ||||| ||||||||
Sbjct 212357 GTCGCTCAGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATC 212298
Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683
|| || || || || || |||||||| || | || || || ||||| | || || |
Sbjct 212297 CGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGA 212238
Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||||||| || || | ||||| || || || || || |||||||| |||||
Sbjct 212237 TTCAACTTCCAGGGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATTTGCAT 212184
Score = 100 bits (110), Expect = 9e-16
Identities = 163/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | | || || || | || ||||| || || || || |
Sbjct 212190 TTTGCATACCACCACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGT 212131
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || | || || |||||||| | || || ||||| ||||| || || ||||| |
Sbjct 212130 AGTCGCTCAGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGT 212071
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || ||||| || || || ||||| || || | || |||||||| || | || || |
Sbjct 212070 CCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAG 212011
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || | |||||||| || || || || || || ||||||||
Sbjct 212010 ACTCCACCTCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956
>seq1
Length=4328376
Score = 123 bits (136), Expect = 8e-23
Identities = 469/732 (64%), Gaps = 12/732 (2%)
Strand=Plus/Minus
Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264
|| ||||| || || || || || || ||||| | || | | | || || | ||
Sbjct 1766303 GGTATCGACTTGGGCACGACCTACTCGTGTGTCGGCGTCTTCCGTGACGACCGCATCGAG 1766244
Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324
|| ||||| || || || |||||| | ||||| || || | ||| || || ||||| |||
Sbjct 1766243 ATCATTGCCAACGACCAGGGTAACCGCACAACACCCTCGTTCGTCGCCTTCACCGACACT 1766184
Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384
|||||| | || |||||| | || || || || | || || || | || || ||
Sbjct 1766183 GAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCACAACACAGTC 1766124
Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAATCTGA 349440
|| || || ||||| || || ||| | | || | ||| | || || | ||
Sbjct 1766123 TTCGACGCCAAGCGCCTCATCGGTCGCAAGTTCGCCGACGCCGAGGTC----CAGGCCGA 1766068
Query 349441 TCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGT 349500
| | || || || || || | | | || | ||| || | || || || || |||||
Sbjct 1766067 TATGAAGCACTTCCCCTTCAA-GATCATCGACAAG--GGCGGCAAGCCCATCATCGAGGT 1766011
Query 349501 TGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGT 349560
||| || || || || || || || || || || || || || ||||| |
Sbjct 1766010 TGAGTACAAGGGCGAGACCAAGCAGTTCACTCCTGAGGAGATCTCCTCCATGGTCCTGAC 1765951
Query 349561 TAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTAC 349620
|| ||| || | ||| || | || | |||| || || | | ||||| || ||
Sbjct 1765950 CAAGATGCGTGAGACTGCCGAGTCTTACCTTGGTGGCACCGTCAACAACGCTGTCATCAC 1765891
Query 349621 TGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGC 349680
|| || || || || || || | ||||| || || || || || || ||| |
Sbjct 1765890 CGTCCCCGCGTACTTCAACGACTCTCAGCGCCAGGCCACCAAGGACGCCGGTCTCATCTC 1765831
Query 349681 GGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCT 349740
||| | || || || | || || || || ||||||||||| || || || || || ||
Sbjct 1765830 GGGCCTCAACGTCCTCCGCATCATCAACGAGCCCACTGCTGCCGCCATCGCCTACGGTCT 1765771
Query 349741 TGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800
|| || | | || || || | || || || || | ||||||||||| ||
Sbjct 1765770 CGACAAGAAGCAGGAGGGCGAGCGCAACGTCCTCATCTTCGACCTGGGTGGTGGTACCTT 1765711
Query 349801 TGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGA 349860
||||| || || || || | || ||||| ||||| || || || | ||||| |||||
Sbjct 1765710 CGATGTTTCTCTCCTCACCATCGAGGAGGGTATTTTCGAGGTCAAGTCTACTGCCGGTGA 1765651
Query 349861 TACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATT 349920
|| || | ||||| || || || || || |||||||| || || ||||| || ||
Sbjct 1765650 CACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTCGTCAACCACTTCGTTAACGAGTT 1765591
Query 349921 TAAGCGTCAAGC 349932
||||| |||||
Sbjct 1765590 CAAGCG-CAAGC 1765580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515251041343919
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |