Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq25 143 8e-29 seq1 123 8e-23 >seq25 Length=380168 Score = 143 bits (158), Expect = 8e-29 Identities = 173/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || || ||||| ||||||||||| || || || || || || Sbjct 211958 CATACCACCGCGCAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 211899 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| || || || ||||| || || || || ||||||||||| || || |||||||| || Sbjct 211898 AGACAAGGTACGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGG 211839 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 ||| || || || || ||||| || || ||| || || || || || | ||| || | | Sbjct 211838 AGGGATACCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTATCGGACGACT 211780 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || ||||| |||| ||||| ||||| | || || || || ||||||||| Sbjct 211779 CGACCTCAAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATT 211727 Score = 125 bits (138), Expect = 2e-23 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563 |||| ||||||||| | | || || || || | || ||||| || || || || || Sbjct 212417 TTACTGACCACCACGCAGACGGAGGACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTA 212358 Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623 || | || || |||||||| || || || ||||||||||| ||||| |||||||| Sbjct 212357 GTCGCTCAGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATC 212298 Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683 || || || || || || |||||||| || | || || || ||||| | || || | Sbjct 212297 CGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGA 212238 Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||||| || || | ||||| || || || || || |||||||| ||||| Sbjct 212237 TTCAACTTCCAGGGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATTTGCAT 212184 Score = 100 bits (110), Expect = 9e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | | || || || | || ||||| || || || || | Sbjct 212190 TTTGCATACCACCACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGT 212131 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || |||||||| | || || ||||| ||||| || || ||||| | Sbjct 212130 AGTCGCTCAGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGT 212071 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||||| || || || ||||| || || | || |||||||| || | || || | Sbjct 212070 CCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAG 212011 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || | |||||||| || || || || || || |||||||| Sbjct 212010 ACTCCACCTCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956 >seq1 Length=4328376 Score = 123 bits (136), Expect = 8e-23 Identities = 469/732 (64%), Gaps = 12/732 (2%) Strand=Plus/Minus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || ||||| || || || || || || ||||| | || | | | || || | || Sbjct 1766303 GGTATCGACTTGGGCACGACCTACTCGTGTGTCGGCGTCTTCCGTGACGACCGCATCGAG 1766244 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || ||||| || || || |||||| | ||||| || || | ||| || || ||||| ||| Sbjct 1766243 ATCATTGCCAACGACCAGGGTAACCGCACAACACCCTCGTTCGTCGCCTTCACCGACACT 1766184 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 |||||| | || |||||| | || || || || | || || || | || || || Sbjct 1766183 GAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCACAACACAGTC 1766124 Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAATCTGA 349440 || || || ||||| || || ||| | | || | ||| | || || | || Sbjct 1766123 TTCGACGCCAAGCGCCTCATCGGTCGCAAGTTCGCCGACGCCGAGGTC----CAGGCCGA 1766068 Query 349441 TCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGT 349500 | | || || || || || | | | || | ||| || | || || || || ||||| Sbjct 1766067 TATGAAGCACTTCCCCTTCAA-GATCATCGACAAG--GGCGGCAAGCCCATCATCGAGGT 1766011 Query 349501 TGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGT 349560 ||| || || || || || || || || || || || || || ||||| | Sbjct 1766010 TGAGTACAAGGGCGAGACCAAGCAGTTCACTCCTGAGGAGATCTCCTCCATGGTCCTGAC 1765951 Query 349561 TAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTAC 349620 || ||| || | ||| || | || | |||| || || | | ||||| || || Sbjct 1765950 CAAGATGCGTGAGACTGCCGAGTCTTACCTTGGTGGCACCGTCAACAACGCTGTCATCAC 1765891 Query 349621 TGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGC 349680 || || || || || || || | ||||| || || || || || || ||| | Sbjct 1765890 CGTCCCCGCGTACTTCAACGACTCTCAGCGCCAGGCCACCAAGGACGCCGGTCTCATCTC 1765831 Query 349681 GGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCT 349740 ||| | || || || | || || || || ||||||||||| || || || || || || Sbjct 1765830 GGGCCTCAACGTCCTCCGCATCATCAACGAGCCCACTGCTGCCGCCATCGCCTACGGTCT 1765771 Query 349741 TGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800 || || | | || || || | || || || || | ||||||||||| || Sbjct 1765770 CGACAAGAAGCAGGAGGGCGAGCGCAACGTCCTCATCTTCGACCTGGGTGGTGGTACCTT 1765711 Query 349801 TGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGA 349860 ||||| || || || || | || ||||| ||||| || || || | ||||| ||||| Sbjct 1765710 CGATGTTTCTCTCCTCACCATCGAGGAGGGTATTTTCGAGGTCAAGTCTACTGCCGGTGA 1765651 Query 349861 TACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATT 349920 || || | ||||| || || || || || |||||||| || || ||||| || || Sbjct 1765650 CACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTCGTCAACCACTTCGTTAACGAGTT 1765591 Query 349921 TAAGCGTCAAGC 349932 ||||| ||||| Sbjct 1765590 CAAGCG-CAAGC 1765580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515251041343919