Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq22 318 6e-82
seq2 127 2e-24
seq3 86.0 7e-12
>seq22
Length=534521
Score = 318 bits (352), Expect = 6e-82
Identities = 523/750 (70%), Gaps = 8/750 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| || | | || |||||||| |||||| ||||||| |||||| |||
Sbjct 116744 TCATGCGTGTGTCTGTCGGCATCCACGGCGACGACATTGAGCGTGTCATTGAGACTTACA 116803
Query 53253 ACTTAATGAGCCAA--AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTAC 53310
|| | ||| ||| |||||||| || || ||| | || ||||||||||||||||||||
Sbjct 116804 ACCTCATGT--CAAGCAAGTACTTCACACATGCCTCTCCCACCCTGTTCAACGCTGGTAC 116861
Query 53311 GAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370
|| ||||| | ||| ||||||||| || | ||||||||||| || |||||
Sbjct 116862 TCCCCAGGCTCAGCTTTCGTCCTGCTTCCTTGTCGACATGAAGGATGATAGCATTGACGG 116921
Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430
|||||| || || |||||| |||||| ||||||||| | | |||||||| ||| |
Sbjct 116922 CATCTATGACACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTCT 116981
Query 53431 CCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488
|| || | || ||||||| | |||| | || || || ||||| | ||
Sbjct 116982 GAACA--TCCACCGCATCCGTGCTACCGGCTCCTACATTGCCGGCACCAACGGTACCTCC 117039
Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548
| || || || || ||||| || |||||||||||||| ||| | |||||| |||||||
Sbjct 117040 AACGGCATTGTTCCCATGCTGCGTGTCTTCAACAACACTGCCAGATACGTCGACCAGGGC 117099
Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608
|| ||| | || | |||||||| ||||||||||| |||||||| || | |
Sbjct 117100 GGCAACAAGAGACCTGGCGCTTTCGCCATTTACCTCGAGCCCTGGCACGCGGATGTCTTT 117159
Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTT 53668
||||| ||||| || || ||| || || | || ||||| || |||||| || ||
Sbjct 117160 GAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGATCCGTGCCCGTGATCTCTTC 117219
Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728
|| || |||||||| ||||| |||||| | || |||||| ||| ||||||
Sbjct 117220 CTCGCCCTCTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAAGAACGGCGAGTGGACT 117279
Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788
|| ||||| || ||||||||||| |||||| | ||| ||||| || ||||| | |
Sbjct 117280 CTCATGTGTCCCAACGAGTGCCCTGGCCTCGCCGATGTGTACGGCGACGAGTTCGAGGCT 117339
Query 53789 ATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTA 53848
|||| || ||||| | |||| || ||||| ||||||| | || |
Sbjct 117340 CTGTACGAGAAGTACGAGGCCGAGGGTCGTGGTCGTCAGAAGATCAAGGCCCAGAAGCTG 117399
Query 53849 TGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGAT 53908
||| | || |||||| || ||| ||||| || | || | |||| ||||||||||
Sbjct 117400 TGGTACGCCATCCTCGAGGCTCAGACTGAGACCGGTAACCCTTTCATGCTCTACAAGGAT 117459
Query 53909 TCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
| | |||| ||||||||||||||||||
Sbjct 117460 GCTGCCAACCGCAAGAGCAACCAGAAGAAC 117489
Score = 91.5 bits (100), Expect = 2e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787
|||||| | ||| ||| || |||||||| | |||| || | | | ||| ||
Sbjct 118262 TCAAGGCTCTCTACAAGACCGTCTGGGAGATCTCTCAGAGGACAGTCGTGCAAATGGCTG 118321
Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847
| || || ||||| | || || ||||||||||||||||||||| |||| || | ||
Sbjct 118322 CCGACCGCGGTGCTTTTATTGATCAGTCCCAGTCTCTGAACATCCACATGAAGGACCCCA 118381
Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907
|| ||| |||| | | | |||||||| || |||||| || |||||||| || |
Sbjct 118382 CAATGGGCAAGATCACCAGCATGCACTTCACTGGCTGGAAGCTCGGTCTCAAGACCGGCA 118441
Query 55908 TGTACTATCTGCGGACCC 55925
||||||| || || ||||
Sbjct 118442 TGTACTACCTTCGTACCC 118459
>seq2
Length=4043926
Score = 127 bits (140), Expect = 2e-24
Identities = 215/306 (70%), Gaps = 8/306 (3%)
Strand=Plus/Minus
Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358
||||| ||| ||||||||||| ||| |||||||| ||||| |||||||| | ||||
Sbjct 2173474 AGGCGGGTGTGAATGTAACGAGCGCTGGCAGCATCGGAACCACCGGCAAGACGAGAACCG 2173415
Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418
|| | |||||| ||||||||| || | ||||| | ||| ||||| || || | |
Sbjct 2173414 AAATTTCCACTGGGCTCCAAGCAATTGACATTGTTCGAGCCGCAGAAGTTCTGCGCAAGG 2173355
Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478
| || || || || | |||||| || || || || || ||||| | ||||
Sbjct 2173354 CCAATGATGGTCATCTGCAGAGACTGCTCACCGTGATGGTAGGCAGTTTGCTCGGACACG 2173295
Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536
|| || |||| || |||||| | || ||||| || || ||| || ||||| |
Sbjct 2173294 TAACCGGCCAACTCGATGACCTTCTTATCCTTGACG--AGATTGCGCTTCAGACAGGCGT 2173237
Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATC--CGCCACGTGAGGGATCGAACGCTT 117594
| || ||||||||||| | |||||||||||| || || ||| || || || || ||| |
Sbjct 2173236 AGATGACCTTGCGCTGGCCTGGCTTCAGACCGTCGACGACAC-TG-GGAATGGACCGCAT 2173179
Query 117595 GATGTC 117600
| ||||
Sbjct 2173178 GTTGTC 2173173
Score = 100 bits (110), Expect = 3e-16
Identities = 196/290 (68%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 152035 ATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAG 152094
||||| || | |||||| ||||| ||||| || || || | || || | |||| |
Sbjct 2173462 ATGTAACGAGCGCTGGCAGCATCGGAACCACCGGCAAGACGAGAACCGAAATTTCCACTG 2173403
Query 152095 GGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTG 152154
||||| | | |||| ||||| | ||| ||| ||||| || | | || ||
Sbjct 2173402 GGCTCCAAGCAATTGACATTGTTCGAGCCGCAGAAGTTCTGCGCAAGGCCAATGATGGTC 2173343
Query 152155 CCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAAC 152214
||||||| | |||||||| || || || || ||||| | | ||| || ||||||
Sbjct 2173342 ATCTGCAGAGACTGCTCACCGTGATGGTAGGCAGTTTGCTCGGACACGTAACCGGCCAAC 2173283
Query 152215 TGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGC 152274
| |||||| | ||| | || || ||| ||||||||||| || |||||||||
Sbjct 2173282 TCGATGACCTTCTTATCCTTGACGAGATTGCGCTTCAGACAGGCGTAGATGACCTTGCGC 2173223
Query 152275 TGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324
||| ||| |||| |||||| || || ||||| || ||| || ||||
Sbjct 2173222 TGGCCTGGCTTCAGACCGTCGACGACACTGGGAATGGACCGCATGTTGTC 2173173
>seq3
Length=3980562
Score = 86.0 bits (94), Expect = 7e-12
Identities = 198/292 (68%), Gaps = 11/292 (4%)
Strand=Plus/Minus
Query 75004 CGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGT 75063
|||| ||||||||| ||||||| | || ||||| ||||| || || || |||
Sbjct 2738905 CGGGCTCCTTGACGTAGGTGTCAATGAGCAGCGAGTAGGTCTCGGAGTGGATGTTCTCCA 2738846
Query 75064 TGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAA 75121
| | |||| | ||||||| | |||||||| | |||||| || || | ||||
Sbjct 2738845 TCATGATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGGAATCTGGACCTCGCCGCTGAAGC 2738786
Query 75122 ATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCAT 75181
|| | | | ||||| ||||||||||||||||||||||||| || ||||| |
Sbjct 2738785 GCTC--GACCAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCCAGGATGTG 2738728
Query 75182 TTTGATAAAGTGGCGCTCATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGC 75238
||| |||| |||||| || ||| |||| ||| || | || ||| |
Sbjct 2738727 CGAGATGAAGTACTTCTCATCCTCGTTGATCTTGTTGTTCCAGTCGTGGAGATCCTTGGA 2738668
Query 75239 CAAATCAATCTCCTCGACCGTCCAGAAA-CTCCCAATC-GCCTTTTTGTACA 75288
| ||| ||||||||| | ||||||||| | || || ||||| |||||||
Sbjct 2738667 GAGATCGATCTCCTCGGCAGTCCAGAAAGATGCC--TCGGCCTTCTTGTACA 2738618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214816645400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |