Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq22 318 6e-82 seq2 127 2e-24 seq3 86.0 7e-12 >seq22 Length=534521 Score = 318 bits (352), Expect = 6e-82 Identities = 523/750 (70%), Gaps = 8/750 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || | | || |||||||| |||||| ||||||| |||||| ||| Sbjct 116744 TCATGCGTGTGTCTGTCGGCATCCACGGCGACGACATTGAGCGTGTCATTGAGACTTACA 116803 Query 53253 ACTTAATGAGCCAA--AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTAC 53310 || | ||| ||| |||||||| || || ||| | || |||||||||||||||||||| Sbjct 116804 ACCTCATGT--CAAGCAAGTACTTCACACATGCCTCTCCCACCCTGTTCAACGCTGGTAC 116861 Query 53311 GAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370 || ||||| | ||| ||||||||| || | ||||||||||| || ||||| Sbjct 116862 TCCCCAGGCTCAGCTTTCGTCCTGCTTCCTTGTCGACATGAAGGATGATAGCATTGACGG 116921 Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430 |||||| || || |||||| |||||| ||||||||| | | |||||||| ||| | Sbjct 116922 CATCTATGACACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTCT 116981 Query 53431 CCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488 || || | || ||||||| | |||| | || || || ||||| | || Sbjct 116982 GAACA--TCCACCGCATCCGTGCTACCGGCTCCTACATTGCCGGCACCAACGGTACCTCC 117039 Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548 | || || || || ||||| || |||||||||||||| ||| | |||||| ||||||| Sbjct 117040 AACGGCATTGTTCCCATGCTGCGTGTCTTCAACAACACTGCCAGATACGTCGACCAGGGC 117099 Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608 || ||| | || | |||||||| ||||||||||| |||||||| || | | Sbjct 117100 GGCAACAAGAGACCTGGCGCTTTCGCCATTTACCTCGAGCCCTGGCACGCGGATGTCTTT 117159 Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTT 53668 ||||| ||||| || || ||| || || | || ||||| || |||||| || || Sbjct 117160 GAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGATCCGTGCCCGTGATCTCTTC 117219 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728 || || |||||||| ||||| |||||| | || |||||| ||| |||||| Sbjct 117220 CTCGCCCTCTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAAGAACGGCGAGTGGACT 117279 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788 || ||||| || ||||||||||| |||||| | ||| ||||| || ||||| | | Sbjct 117280 CTCATGTGTCCCAACGAGTGCCCTGGCCTCGCCGATGTGTACGGCGACGAGTTCGAGGCT 117339 Query 53789 ATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTA 53848 |||| || ||||| | |||| || ||||| ||||||| | || | Sbjct 117340 CTGTACGAGAAGTACGAGGCCGAGGGTCGTGGTCGTCAGAAGATCAAGGCCCAGAAGCTG 117399 Query 53849 TGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGAT 53908 ||| | || |||||| || ||| ||||| || | || | |||| |||||||||| Sbjct 117400 TGGTACGCCATCCTCGAGGCTCAGACTGAGACCGGTAACCCTTTCATGCTCTACAAGGAT 117459 Query 53909 TCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 | | |||| |||||||||||||||||| Sbjct 117460 GCTGCCAACCGCAAGAGCAACCAGAAGAAC 117489 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 |||||| | ||| ||| || |||||||| | |||| || | | | ||| || Sbjct 118262 TCAAGGCTCTCTACAAGACCGTCTGGGAGATCTCTCAGAGGACAGTCGTGCAAATGGCTG 118321 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847 | || || ||||| | || || ||||||||||||||||||||| |||| || | || Sbjct 118322 CCGACCGCGGTGCTTTTATTGATCAGTCCCAGTCTCTGAACATCCACATGAAGGACCCCA 118381 Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907 || ||| |||| | | | |||||||| || |||||| || |||||||| || | Sbjct 118382 CAATGGGCAAGATCACCAGCATGCACTTCACTGGCTGGAAGCTCGGTCTCAAGACCGGCA 118441 Query 55908 TGTACTATCTGCGGACCC 55925 ||||||| || || |||| Sbjct 118442 TGTACTACCTTCGTACCC 118459 >seq2 Length=4043926 Score = 127 bits (140), Expect = 2e-24 Identities = 215/306 (70%), Gaps = 8/306 (3%) Strand=Plus/Minus Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358 ||||| ||| ||||||||||| ||| |||||||| ||||| |||||||| | |||| Sbjct 2173474 AGGCGGGTGTGAATGTAACGAGCGCTGGCAGCATCGGAACCACCGGCAAGACGAGAACCG 2173415 Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418 || | |||||| ||||||||| || | ||||| | ||| ||||| || || | | Sbjct 2173414 AAATTTCCACTGGGCTCCAAGCAATTGACATTGTTCGAGCCGCAGAAGTTCTGCGCAAGG 2173355 Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478 | || || || || | |||||| || || || || || ||||| | |||| Sbjct 2173354 CCAATGATGGTCATCTGCAGAGACTGCTCACCGTGATGGTAGGCAGTTTGCTCGGACACG 2173295 Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536 || || |||| || |||||| | || ||||| || || ||| || ||||| | Sbjct 2173294 TAACCGGCCAACTCGATGACCTTCTTATCCTTGACG--AGATTGCGCTTCAGACAGGCGT 2173237 Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATC--CGCCACGTGAGGGATCGAACGCTT 117594 | || ||||||||||| | |||||||||||| || || ||| || || || || ||| | Sbjct 2173236 AGATGACCTTGCGCTGGCCTGGCTTCAGACCGTCGACGACAC-TG-GGAATGGACCGCAT 2173179 Query 117595 GATGTC 117600 | |||| Sbjct 2173178 GTTGTC 2173173 Score = 100 bits (110), Expect = 3e-16 Identities = 196/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 152035 ATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAG 152094 ||||| || | |||||| ||||| ||||| || || || | || || | |||| | Sbjct 2173462 ATGTAACGAGCGCTGGCAGCATCGGAACCACCGGCAAGACGAGAACCGAAATTTCCACTG 2173403 Query 152095 GGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTG 152154 ||||| | | |||| ||||| | ||| ||| ||||| || | | || || Sbjct 2173402 GGCTCCAAGCAATTGACATTGTTCGAGCCGCAGAAGTTCTGCGCAAGGCCAATGATGGTC 2173343 Query 152155 CCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAAC 152214 ||||||| | |||||||| || || || || ||||| | | ||| || |||||| Sbjct 2173342 ATCTGCAGAGACTGCTCACCGTGATGGTAGGCAGTTTGCTCGGACACGTAACCGGCCAAC 2173283 Query 152215 TGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGC 152274 | |||||| | ||| | || || ||| ||||||||||| || ||||||||| Sbjct 2173282 TCGATGACCTTCTTATCCTTGACGAGATTGCGCTTCAGACAGGCGTAGATGACCTTGCGC 2173223 Query 152275 TGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 ||| ||| |||| |||||| || || ||||| || ||| || |||| Sbjct 2173222 TGGCCTGGCTTCAGACCGTCGACGACACTGGGAATGGACCGCATGTTGTC 2173173 >seq3 Length=3980562 Score = 86.0 bits (94), Expect = 7e-12 Identities = 198/292 (68%), Gaps = 11/292 (4%) Strand=Plus/Minus Query 75004 CGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGT 75063 |||| ||||||||| ||||||| | || ||||| ||||| || || || ||| Sbjct 2738905 CGGGCTCCTTGACGTAGGTGTCAATGAGCAGCGAGTAGGTCTCGGAGTGGATGTTCTCCA 2738846 Query 75064 TGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAA 75121 | | |||| | ||||||| | |||||||| | |||||| || || | |||| Sbjct 2738845 TCATGATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGGAATCTGGACCTCGCCGCTGAAGC 2738786 Query 75122 ATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCAT 75181 || | | | ||||| ||||||||||||||||||||||||| || ||||| | Sbjct 2738785 GCTC--GACCAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCCAGGATGTG 2738728 Query 75182 TTTGATAAAGTGGCGCTCATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGC 75238 ||| |||| |||||| || ||| |||| ||| || | || ||| | Sbjct 2738727 CGAGATGAAGTACTTCTCATCCTCGTTGATCTTGTTGTTCCAGTCGTGGAGATCCTTGGA 2738668 Query 75239 CAAATCAATCTCCTCGACCGTCCAGAAA-CTCCCAATC-GCCTTTTTGTACA 75288 | ||| ||||||||| | ||||||||| | || || ||||| ||||||| Sbjct 2738667 GAGATCGATCTCCTCGGCAGTCCAGAAAGATGCC--TCGGCCTTCTTGTACA 2738618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214816645400