Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq2 132 4e-26 >seq2 Length=4043926 Score = 132 bits (146), Expect = 4e-26 Identities = 260/378 (69%), Gaps = 6/378 (2%) Strand=Plus/Plus Query 30082 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 30141 |||||| || || || ||||| || |||| |||||||| |||| || |||||| Sbjct 1046206 GTGGCATGGCGGCAGCGCCATCTTCTTCAGGTCTGCAGGGTTCCACGCGCTCATGATGAT 1046265 Query 30142 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 30201 || | ||| | |||||||| ||| || ||| | | ||||| || || || Sbjct 1046266 CCGGCGGTCGTACGGGTTGTTTTTGAGCTTGTGCACCACCTCCGCGAGCTGGTCGACGCC 1046325 Query 30202 CATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAA 30261 ||| | ||| || | | | ||| || || || || ||||||| ||||||||| Sbjct 1046326 TTGCCCTGTGTAATCCGTCTTGGCGTCGACATATTCCGCCCCAAAATGCCGCCACTGGAA 1046385 Query 30262 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA-AGCCCCTC-TTGTCCAAA 30319 ||| ||||| || |||||||| || | || | ||| ||| || ||| | |||| | Sbjct 1046386 CCCATACACAGGGCCCAGGTCGCCGACCTCGCGGTG--CGACAGTCCCACACTGTCGAGG 1046443 Query 30320 AAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAG 30379 || || | ||| |||||| | ||||||||||| || ||| || ||||| |||| Sbjct 1046444 AACTCGCGGGACCCGTTGCCATCCCAGATCTTGACGCCCGCTTCGGAGAGGGGCAAGGAG 1046503 Query 30380 TTTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCT 30438 ||| | ||||| ||||||||| || ||||| | |||||||| ||| ||||| | Sbjct 1046504 GAGGTGCAGCCCTC-GACGAACCAGAGGAGCTCGGCGACGACGGCTTTCAGGAAGACGCG 1046562 Query 30439 CTTGGTCGTGAGGAGGGG 30456 ||| ||||||||||| || Sbjct 1046563 CTTTGTCGTGAGGAGCGG 1046580 Score = 100 bits (110), Expect = 2e-16 Identities = 198/289 (69%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 29759 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 29818 || || ||||| ||| || ||||||||| |||| | |||| | ||| || || Sbjct 1045820 TGCGGCTCGTAGCCCAGCACCACGAAATCCTCCACCTTCCACCCGTCAATACTC-CCGCC 1045878 Query 29819 CT----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 29874 || ||| || ||| ||| | ||||| || ||||||| ||||| ||| ||| Sbjct 1045879 CTTCTCCCTCTTGATCTCCAGCTTCGGAAACTCCCTCGGCTCCCGCTCGACCTGCACCTT 1045938 Query 29875 CAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTC 29933 |||| ||||||| || ||| ||||| ||||| |||| | ||| | | || | Sbjct 1045939 GAGCGCGTCCACGTGGTCGCAGTACACGTGCGCGTCGCCCATGACGTGCGTGAGGCTG-C 1045997 Query 29934 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29993 |||| | || || |||| || | ||||| |||||| || | |||||||||||||| Sbjct 1045998 CCGGCACGAGGTCGCACACGTACGCGAGCATGTGCGTGAGCAGCGCGTAGCTGGCGATGT 1046057 Query 29994 TAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042 | ||||| || || || ||||| || | || | ||||||||||| || Sbjct 1046058 TGAAGGGCACGCCCAGGCCCATATCGCAGGAGCGTTGGTAGAGCTGGCA 1046106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309543319916