Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq2 132 4e-26
>seq2
Length=4043926
Score = 132 bits (146), Expect = 4e-26
Identities = 260/378 (69%), Gaps = 6/378 (2%)
Strand=Plus/Plus
Query 30082 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 30141
|||||| || || || ||||| || |||| |||||||| |||| || ||||||
Sbjct 1046206 GTGGCATGGCGGCAGCGCCATCTTCTTCAGGTCTGCAGGGTTCCACGCGCTCATGATGAT 1046265
Query 30142 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 30201
|| | ||| | |||||||| ||| || ||| | | ||||| || || ||
Sbjct 1046266 CCGGCGGTCGTACGGGTTGTTTTTGAGCTTGTGCACCACCTCCGCGAGCTGGTCGACGCC 1046325
Query 30202 CATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAA 30261
||| | ||| || | | | ||| || || || || ||||||| |||||||||
Sbjct 1046326 TTGCCCTGTGTAATCCGTCTTGGCGTCGACATATTCCGCCCCAAAATGCCGCCACTGGAA 1046385
Query 30262 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA-AGCCCCTC-TTGTCCAAA 30319
||| ||||| || |||||||| || | || | ||| ||| || ||| | |||| |
Sbjct 1046386 CCCATACACAGGGCCCAGGTCGCCGACCTCGCGGTG--CGACAGTCCCACACTGTCGAGG 1046443
Query 30320 AAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAG 30379
|| || | ||| |||||| | ||||||||||| || ||| || ||||| ||||
Sbjct 1046444 AACTCGCGGGACCCGTTGCCATCCCAGATCTTGACGCCCGCTTCGGAGAGGGGCAAGGAG 1046503
Query 30380 TTTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCT 30438
||| | ||||| ||||||||| || ||||| | |||||||| ||| ||||| |
Sbjct 1046504 GAGGTGCAGCCCTC-GACGAACCAGAGGAGCTCGGCGACGACGGCTTTCAGGAAGACGCG 1046562
Query 30439 CTTGGTCGTGAGGAGGGG 30456
||| ||||||||||| ||
Sbjct 1046563 CTTTGTCGTGAGGAGCGG 1046580
Score = 100 bits (110), Expect = 2e-16
Identities = 198/289 (69%), Gaps = 7/289 (2%)
Strand=Plus/Plus
Query 29759 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 29818
|| || ||||| ||| || ||||||||| |||| | |||| | ||| || ||
Sbjct 1045820 TGCGGCTCGTAGCCCAGCACCACGAAATCCTCCACCTTCCACCCGTCAATACTC-CCGCC 1045878
Query 29819 CT----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 29874
|| ||| || ||| ||| | ||||| || ||||||| ||||| ||| |||
Sbjct 1045879 CTTCTCCCTCTTGATCTCCAGCTTCGGAAACTCCCTCGGCTCCCGCTCGACCTGCACCTT 1045938
Query 29875 CAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTC 29933
|||| ||||||| || ||| ||||| ||||| |||| | ||| | | || |
Sbjct 1045939 GAGCGCGTCCACGTGGTCGCAGTACACGTGCGCGTCGCCCATGACGTGCGTGAGGCTG-C 1045997
Query 29934 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29993
|||| | || || |||| || | ||||| |||||| || | ||||||||||||||
Sbjct 1045998 CCGGCACGAGGTCGCACACGTACGCGAGCATGTGCGTGAGCAGCGCGTAGCTGGCGATGT 1046057
Query 29994 TAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042
| ||||| || || || ||||| || | || | ||||||||||| ||
Sbjct 1046058 TGAAGGGCACGCCCAGGCCCATATCGCAGGAGCGTTGGTAGAGCTGGCA 1046106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406309543319916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |