Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq25 122 8e-23 seq9 109 5e-19 >seq25 Length=380168 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||||| || |||||| | || || || ||||| ||| |||| Sbjct 212184 ATGCAAATTTTTGTCAAGACTCTTACTGGCAAGACCATCACCCTGGAAGTTGAATCGTCG 212243 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||| ||||| || ||||| || || ||||| Sbjct 212244 GACACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAG 212303 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || || ||||||| | || | ||| |||||| Sbjct 212304 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACTCTGAGCGACTACAAC 212363 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| || || |||| | ||| |||| ||||| Sbjct 212364 ATCCAGAAGGAGTCGACATTGCACCTGGTCCTCCGTCTGCGTGGTGG 212410 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | ||||||||||| || || ||||| Sbjct 211728 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACTCTTGAGGTCGAGTCGTCC 211787 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || || ||||| || || || || |||||||| Sbjct 211788 GATACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCTCCCGATCAG 211847 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || ||||| || | || || | ||| | || || |||||| Sbjct 211848 CAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGTACCTTGTCTGACTACAAC 211907 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | ||| | || | ||| |||| ||||| || Sbjct 211908 ATCCAGAAGGAGTCTACTCTCCATCTCGTCCTCCGTCTGCGCGGTGGTAT 211957 >seq9 Length=1091098 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||| |||||| |||| || || || ||||| |||| Sbjct 140571 CATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTC 140630 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | ||||| || || || ||||| || ||||| || || || || Sbjct 140631 CGACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 140690 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | ||||||||| || | || || | || | || || ||||| Sbjct 140691 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCGGACTACAA 140750 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| || |||||||||||| | || | || || | |||| ||||| Sbjct 140751 CATCCAGAAGGAGTCGACCCTCCACCTCGTGCTGAGACTGCGTGGTGG 140798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917459488960