Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq2 118 1e-21
>seq2
Length=4043926
Score = 118 bits (130), Expect = 1e-21
Identities = 273/400 (68%), Gaps = 10/400 (3%)
Strand=Plus/Plus
Query 6728 ACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786
||||||||||| ||| | ||||||| || || ||||||||| || || ||
Sbjct 1046186 ACGTAGAATTGCGCAAACA-TGTGGCATGGCGGCAGCGCCATCTTCTTCAGGTCTGCAGG 1046244
Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846
||||||||||| ||| | ||||| | ||| | ||||| || | ||| | |||
Sbjct 1046245 GTTCCACGCGCTCATGATGATCCGGCGGTCGTACGGGTTGTTTTTGAGCTTGTGCACCAC 1046304
Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCG 6905
| | |||||||| | || || || | || |||| ||| || | | ||| ||||
Sbjct 1046305 CTCCGCGAGCTGGTCGACGCCTTGCCCTGTGTAATCCGTCTTGGCGTCGAC-ATATTCCG 1046363
Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965
||||||| || | |||||||||||| || || ||||||| |||||| ||| || | ||
Sbjct 1046364 CCCCAAAATGCCGCCACTGGAACCCATACACAGGGCCCAGGTCGCCGACCT--CGCGGTG 1046421
Query 6966 GGA-ACCCCCGC-TTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023
|| | ||| | |||| || || || || ||||||| | ||||||||||| || ||
Sbjct 1046422 CGACAGTCCCACACTGTCGAGGAACTCGCGGGACCCGTTGCCATCCCAGATCTTGACGCC 1046481
Query 7024 CCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTC-ACGAACCACAGCAGCTCCTCGA 7082
| ||||| | || | || || ||||| |||||||| || ||||| |||
Sbjct 1046482 CGCTTCGGAGAGGGGCAAGGAGGAGGT-GCAGCCCTCGACGAACCAGAGGAGCTCGGCGA 1046540
Query 7083 CCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122
| ||| | ||| | | || || || ||||| || |||||
Sbjct 1046541 CGACGGCTTTCAGGAAGACGCGCTTTGTCGTGAGGAGCGG 1046580
Score = 118 bits (130), Expect = 1e-21
Identities = 273/400 (68%), Gaps = 10/400 (3%)
Strand=Plus/Minus
Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282
||||| || ||||| || || || | | ||| | ||| |||| ||||| || ||||||
Sbjct 1046580 CCGCTCCTCACGACAAAGCGCGTCTTCCTGAAAGCCGTCGTCGCCGAGCTCCTCTGGTTC 1046521
Query 34283 GT-GAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGC 34341
|| ||||| || || | || | ||||| ||| || ||||||||||| |
Sbjct 1046520 GTCGAGGGCTGC-ACCTCCTCCTTGCCCCTCTCCGAAGCGGGCGTCAAGATCTGGGATGG 1046462
Query 34342 TCACGGGTCTCGAGACTTTCTGGACAA-GCGGGGGT-TCCCATCTCGGGAGGAGGGCGAC 34399
||||||| || || || || |||| | ||| | || || | || ||| ||||||
Sbjct 1046461 CAACGGGTCCCGCGAGTTCCTCGACAGTGTGGGACTGTCGCACCGCG--AGGTCGGCGAC 1046404
Query 34400 TTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAA 34459
||||||| || || |||||||||||| | || ||||||||||| ||| | | || ||
Sbjct 1046403 CTGGGCCCTGTGTATGGGTTCCAGTGGCGGCATTTTGGGGCGGAATAT-GTCGACGCCAA 1046345
Query 34460 G-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCG 34518
| |||| || | || || || | |||||||| | | ||| | ||| | ||
Sbjct 1046344 GACGGATTACACAGGGCAAGGCGTCGACCAGCTCGCGGAGGTGGTGCACAAGCTCAAAAA 1046285
Query 34519 GAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGAT 34578
||||| | ||| | ||||| | ||| ||||||||||||| || || |||
Sbjct 1046284 CAACCCGTACGACCGCCGGATCATCATGAGCGCGTGGAACCCTGCAGACCTGAAGAAGAT 1046225
Query 34579 GGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT 34617
|||||| || || ||||||| | ||| |||||||||||
Sbjct 1046224 GGCGCTGCCGCCATGCCACA-TGTTTGCGCAATTCTACGT 1046186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448261430632560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |