Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq25 185 2e-41
seq9 176 1e-38
seq5 125 2e-23
>seq25
Length=380168
Score = 185 bits (204), Expect = 2e-41
Identities = 168/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| ||||||||||| || |||||||| || || | || || ||||| ||
Sbjct 211711 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTTCTTCCGTCC 211652
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| ||||| || || || ||||| | || |||||||||
Sbjct 211651 TCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCC 211592
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||||||||| ||| || ||||| |||||||| |||
Sbjct 211591 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTC 211532
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || ||||| || || | ||||||
Sbjct 211531 TTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 211500
Score = 174 bits (192), Expect = 4e-38
Identities = 164/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
|| ||||| | || ||||| || |||||||| || || ||||| | |||||||||
Sbjct 212164 ACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCC 212105
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
| ||||||||| |||||||| ||||| || ||||| || |||| || ||||||||||||
Sbjct 212104 AACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 212045
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
||||| ||||| || ||||||||||| || || ||||| |||||||| ||||||
Sbjct 212044 ATCTTGGACTTCACATTATCGATGGTGTCGGAAGACTCCACCTCCAGAGTGATGGTCTTT 211985
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||||||||| || || | ||||||
Sbjct 211984 CCAGTGAGAGTCTTGACGAAGATCTGCAT 211956
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| || || ||||| ||||| || |||||||| || || | | ||| | |||||
Sbjct 211939 AGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTACGGCCATCC 211880
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || ||||| ||||| || || || ||||| | || |||||||||
Sbjct 211879 TCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCC 211820
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| |||||||| || || || ||||| ||||| || |||
Sbjct 211819 TGGATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCGACCTCAAGAGTAATGGTC 211760
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || || | ||||| || || | |||||||
Sbjct 211759 TTGCCGGTCAAGGTCTTGACGAAGATCTGCATT 211727
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| | || ||||| || |||||||| || || || || | ||||||
Sbjct 212395 AGGACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCT 212336
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || || |||||||| || || || || || || | || |||||||||
Sbjct 212335 TCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCC 212276
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| || |||||||| || |||||| || || ||||| |||
Sbjct 212275 TGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGATTCAACTTCCAGGGTGATGGTC 212216
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| ||||| | |||||
Sbjct 212215 TTGCCAGTAAGAGTCTTGACAAAAATTTGCAT 212184
>seq9
Length=1091098
Score = 176 bits (194), Expect = 1e-38
Identities = 172/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| ||||| || || ||||| || || ||||| || |||||||| || |||| || ||
Sbjct 140793 ACGCAGTCTCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGT 140734
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || ||||||||||| |||||||| ||||| || ||||| || |||| ||
Sbjct 140733 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCC 140674
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || ||||| ||||| ||||| || || ||||||||
Sbjct 140673 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGACGACTCCACCTCGAG 140614
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| ||||| || ||||| || || | ||||||
Sbjct 140613 GGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 140572
>seq5
Length=2741173
Score = 125 bits (138), Expect = 2e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | || |||| || || || ||||||||||| ||||||||
Sbjct 2268399 TTCTGGATGTTGTAGTCAGACAGAGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 2268340
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || ||||| || || | || ||||| ||||||||||| || || || |||
Sbjct 2268339 AGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 2268280
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||||| || || ||||| || ||||| ||||| ||||| || ||||| || ||
Sbjct 2268279 ATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 2268221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159149430667145
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |