Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq25 158 3e-33 seq9 143 6e-29 seq5 111 4e-19 >seq25 Length=380168 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||||||||| || || |||| ||||| |||| | ||||| || || Sbjct 211711 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTTCTTCCGTCC 211652 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || || ||||| || ||||| |||||||| Sbjct 211651 TCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCC 211592 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| |||| || || || | ||||| ||| Sbjct 211591 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTC 211532 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||| || || | ||| | ||||| Sbjct 211531 TTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 211500 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || ||||| | || || || || |||| ||||| ||| || || Sbjct 212177 ACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 212118 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| ||||||||||| || || || ||||| || ||||| || Sbjct 212117 GCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCC 212058 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| ||||||||||| || | ||||| || | Sbjct 212057 CTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAGACTCCACCTCCAG 211998 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| || | ||| | ||||| Sbjct 211997 AGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956 >seq9 Length=1091098 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| |||||||| || |||||||| || || || || |||| ||||| || | | ||| Sbjct 140793 ACGCAGTCTCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGT 140734 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| || ||||| || Sbjct 140733 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCC 140674 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||| ||||| || | ||||| || | Sbjct 140673 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGACGACTCCACCTCGAG 140614 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||||| || || | ||| | ||||| Sbjct 140613 GGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 140572 >seq5 Length=2741173 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| || | || ||| | || || || |||||||| || |||||||| Sbjct 2268399 TTCTGGATGTTGTAGTCAGACAGAGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 2268340 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || || || || ||||| || |||||||| ||| ||| ||| Sbjct 2268339 AGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 2268280 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| || | ||||| || | ||||| ||||||||||||| || || | ||| Sbjct 2268279 ATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 2268221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528556680062