Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq2 120 2e-22 >seq2 Length=4043926 Score = 120 bits (132), Expect = 2e-22 Identities = 203/290 (70%), Gaps = 7/290 (2%) Strand=Plus/Plus Query 29530 GTGAGGGTCGTAGCCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCAC 29589 ||| || ||||||||| || ||||||||| |||| | |||| | ||| || | Sbjct 1045819 GTGCGGCTCGTAGCCCAGCACCACGAAATCCTCCACCTTCCACCCGTCAATACTC-CCGC 1045877 Query 29590 CCT----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCC 29645 ||| ||| || ||| ||| | ||||| || ||||||| ||||| ||| | | Sbjct 1045878 CCTTCTCCCTCTTGATCTCCAGCTTCGGAAACTCCCTCGGCTCCCGCTCGACCTGCACCT 1045937 Query 29646 TCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTG-GACAAACTCT 29704 | |||| ||||||||||| ||| ||||| || || |||| | ||| | | || Sbjct 1045938 TGAGCGCGTCCACGTGGTCGCAGTACACGTGCGCGTCGCCCATGACGTGCGTGAGGCTG- 1045996 Query 29705 CCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATG 29764 ||||| | || || |||| || | ||||| |||||| || | ||||||||||||| Sbjct 1045997 CCCGGCACGAGGTCGCACACGTACGCGAGCATGTGCGTGAGCAGCGCGTAGCTGGCGATG 1046056 Query 29765 TTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 || |||||||| || || ||||| || | || | |||||||||||||| Sbjct 1046057 TTGAAGGGCACGCCCAGGCCCATATCGCAGGAGCGTTGGTAGAGCTGGCA 1046106 Score = 118 bits (130), Expect = 9e-22 Identities = 159/215 (74%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA-A 30075 ||||||| |||||||||||| ||||| || |||||||| || | || | ||| ||| | Sbjct 1046369 AAATGCCGCCACTGGAACCCATACACAGGGCCCAGGTCGCCGACCTCGCGGTG--CGACA 1046426 Query 30076 GCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 | ||| | |||| | || || | ||| |||||| | ||||||||||| || ||| | Sbjct 1046427 GTCCCACACTGTCGAGGAACTCGCGGGACCCGTTGCCATCCCAGATCTTGACGCCCGCTT 1046486 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACG 30193 ||||||| |||| ||| | ||||| ||||||||| || ||||| | |||||| Sbjct 1046487 CGGAGAGGGGCAAGGAGGAGGTGCAGCCCTC-GACGAACCAGAGGAGCTCGGCGACGACG 1046545 Query 30194 GCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 || ||| ||||| | ||| ||||||||||| || Sbjct 1046546 GCTTTCAGGAAGACGCGCTTTGTCGTGAGGAGCGG 1046580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162343630278