Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq2 129 4e-25 >seq2 Length=4043926 Score = 129 bits (142), Expect = 4e-25 Identities = 259/378 (69%), Gaps = 6/378 (2%) Strand=Plus/Plus Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407 |||||| || || || ||||| || |||| |||||||| |||| || |||||| Sbjct 1046206 GTGGCATGGCGGCAGCGCCATCTTCTTCAGGTCTGCAGGGTTCCACGCGCTCATGATGAT 1046265 Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 27467 || | ||| | |||||||| ||| || ||| | | ||||| || || || Sbjct 1046266 CCGGCGGTCGTACGGGTTGTTTTTGAGCTTGTGCACCACCTCCGCGAGCTGGTCGACGCC 1046325 Query 27468 CATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAA 27527 ||| | ||| || | | ||| || || || || ||||||| ||| ||||| Sbjct 1046326 TTGCCCTGTGTAATCCGTCTTGGCGTCGACATATTCCGCCCCAAAATGCCGCCACTGGAA 1046385 Query 27528 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA-AGCCCCTCT-TGTCCAAA 27585 ||| ||||| || |||||||| || | || | |||| || || ||| | |||| | Sbjct 1046386 CCCATACACAGGGCCCAGGTCGCCGACCTCGCGGTGC--GACAGTCCCACACTGTCGAGG 1046443 Query 27586 AAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAG 27645 || || | ||| |||||| | ||||||||||| || ||| |||||||| |||| Sbjct 1046444 AACTCGCGGGACCCGTTGCCATCCCAGATCTTGACGCCCGCTTCGGAGAGGGGCAAGGAG 1046503 Query 27646 TTTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCT 27704 ||| | ||||| ||||||||| || ||||| | |||||||| ||| ||||| | Sbjct 1046504 GAGGTGCAGCCCTC-GACGAACCAGAGGAGCTCGGCGACGACGGCTTTCAGGAAGACGCG 1046562 Query 27705 CTTGGTCGTGAGGAGGGG 27722 ||| ||||||||||| || Sbjct 1046563 CTTTGTCGTGAGGAGCGG 1046580 Score = 104 bits (114), Expect = 2e-17 Identities = 199/289 (69%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 27025 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 27084 || || ||||| ||| || ||||||||| |||| | |||| | ||| || || Sbjct 1045820 TGCGGCTCGTAGCCCAGCACCACGAAATCCTCCACCTTCCACCCGTCAATACTC-CCGCC 1045878 Query 27085 CT----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 27140 || ||| || ||| ||| | ||||| || ||||||| ||||| ||| ||| Sbjct 1045879 CTTCTCCCTCTTGATCTCCAGCTTCGGAAACTCCCTCGGCTCCCGCTCGACCTGCACCTT 1045938 Query 27141 CAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTC 27199 |||| |||||||| || ||| ||||| ||||| |||| | ||| | | || | Sbjct 1045939 GAGCGCGTCCACGTGGTCGCAGTACACGTGCGCGTCGCCCATGACGTGCGTGAGGCTG-C 1045997 Query 27200 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 27259 |||| | || || |||| || | ||||| |||||| || | |||||||||||||| Sbjct 1045998 CCGGCACGAGGTCGCACACGTACGCGAGCATGTGCGTGAGCAGCGCGTAGCTGGCGATGT 1046057 Query 27260 TAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308 | ||||| || || || ||||| || | || | ||||||||||| || Sbjct 1046058 TGAAGGGCACGCCCAGGCCCATATCGCAGGAGCGTTGGTAGAGCTGGCA 1046106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506420917163