Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq2 129 4e-25
>seq2
Length=4043926
Score = 129 bits (142), Expect = 4e-25
Identities = 259/378 (69%), Gaps = 6/378 (2%)
Strand=Plus/Plus
Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407
|||||| || || || ||||| || |||| |||||||| |||| || ||||||
Sbjct 1046206 GTGGCATGGCGGCAGCGCCATCTTCTTCAGGTCTGCAGGGTTCCACGCGCTCATGATGAT 1046265
Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 27467
|| | ||| | |||||||| ||| || ||| | | ||||| || || ||
Sbjct 1046266 CCGGCGGTCGTACGGGTTGTTTTTGAGCTTGTGCACCACCTCCGCGAGCTGGTCGACGCC 1046325
Query 27468 CATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAA 27527
||| | ||| || | | ||| || || || || ||||||| ||| |||||
Sbjct 1046326 TTGCCCTGTGTAATCCGTCTTGGCGTCGACATATTCCGCCCCAAAATGCCGCCACTGGAA 1046385
Query 27528 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA-AGCCCCTCT-TGTCCAAA 27585
||| ||||| || |||||||| || | || | |||| || || ||| | |||| |
Sbjct 1046386 CCCATACACAGGGCCCAGGTCGCCGACCTCGCGGTGC--GACAGTCCCACACTGTCGAGG 1046443
Query 27586 AAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAG 27645
|| || | ||| |||||| | ||||||||||| || ||| |||||||| ||||
Sbjct 1046444 AACTCGCGGGACCCGTTGCCATCCCAGATCTTGACGCCCGCTTCGGAGAGGGGCAAGGAG 1046503
Query 27646 TTTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCT 27704
||| | ||||| ||||||||| || ||||| | |||||||| ||| ||||| |
Sbjct 1046504 GAGGTGCAGCCCTC-GACGAACCAGAGGAGCTCGGCGACGACGGCTTTCAGGAAGACGCG 1046562
Query 27705 CTTGGTCGTGAGGAGGGG 27722
||| ||||||||||| ||
Sbjct 1046563 CTTTGTCGTGAGGAGCGG 1046580
Score = 104 bits (114), Expect = 2e-17
Identities = 199/289 (69%), Gaps = 7/289 (2%)
Strand=Plus/Plus
Query 27025 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 27084
|| || ||||| ||| || ||||||||| |||| | |||| | ||| || ||
Sbjct 1045820 TGCGGCTCGTAGCCCAGCACCACGAAATCCTCCACCTTCCACCCGTCAATACTC-CCGCC 1045878
Query 27085 CT----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 27140
|| ||| || ||| ||| | ||||| || ||||||| ||||| ||| |||
Sbjct 1045879 CTTCTCCCTCTTGATCTCCAGCTTCGGAAACTCCCTCGGCTCCCGCTCGACCTGCACCTT 1045938
Query 27141 CAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTC 27199
|||| |||||||| || ||| ||||| ||||| |||| | ||| | | || |
Sbjct 1045939 GAGCGCGTCCACGTGGTCGCAGTACACGTGCGCGTCGCCCATGACGTGCGTGAGGCTG-C 1045997
Query 27200 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 27259
|||| | || || |||| || | ||||| |||||| || | ||||||||||||||
Sbjct 1045998 CCGGCACGAGGTCGCACACGTACGCGAGCATGTGCGTGAGCAGCGCGTAGCTGGCGATGT 1046057
Query 27260 TAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308
| ||||| || || || ||||| || | || | ||||||||||| ||
Sbjct 1046058 TGAAGGGCACGCCCAGGCCCATATCGCAGGAGCGTTGGTAGAGCTGGCA 1046106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369506420917163
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |