Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq25 125 2e-23 seq9 118 2e-21 seq5 104 5e-17 >seq25 Length=380168 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || ||||| ||||| || ||||||||||| |||| | ||||| Sbjct 211718 GAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTTCT 211659 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || || |||||||| || | |||||| || | | ||| || || Sbjct 211658 TCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTC 211599 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | | |||| || ||| || |||||||| Sbjct 211598 CTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGT 211539 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||| || ||||| ||||||| |||||| Sbjct 211538 GATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 211500 Score = 116 bits (128), Expect = 9e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| ||||||||||| || ||||||||||| || | || || | ||||| Sbjct 211940 GAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTACGGCCATC 211881 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || || ||||| || | |||||| || | | ||| || ||||| || Sbjct 211880 CTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTC 211821 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | | || || ||| || ||||||||||| || Sbjct 211820 CTGGATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCGACCTCAAGAGTAATGGT 211761 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || | ||||| ||||||| ||||||| Sbjct 211760 CTTGCCGGTCAAGGTCTTGACGAAGATCTGCATT 211727 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || ||||| || ||||||||||| ||| | || | |||||||| | || || Sbjct 212152 GTTGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCCAACTGCTTGCCA 212093 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 |||||||| || | ||||||||||| | || || ||||| || || || || || Sbjct 212092 GCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTC 212033 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | | |||| ||| ||| || || ||||| || || || || ||||||||| Sbjct 212032 ACATTATCGATGGTGTCGGAAGACTCCACCTCCAGAGTGATGGTCTTTCCAGTGAGAGTC 211973 Query 152088 TTCACGAAGACCTGCAT 152104 || ||||||| |||||| Sbjct 211972 TTGACGAAGATCTGCAT 211956 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || | || ||||| || ||||||||||| ||| | ||| | ||||| Sbjct 212396 GAGGACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATC 212337 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || || || |||||||| | |||||| |||| | ||| || ||||| || Sbjct 212336 TTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTC 212277 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||| || ||||| | || | | |||| || || ||||| || || || || Sbjct 212276 CTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGATTCAACTTCCAGGGTGATGGT 212217 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || |||||||| || || | ||||| Sbjct 212216 CTTGCCAGTAAGAGTCTTGACAAAAATTTGCAT 212184 >seq9 Length=1091098 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| || || || || || || ||||| || ||||||||||| || | | ||| | Sbjct 140789 AGTCTCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGG 140730 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || || || ||||||||||| || | ||||||||||| | || || ||| Sbjct 140729 CCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCC 140670 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || ||||| | || | |||| || ||| || || || || Sbjct 140669 TTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGACGACTCCACCTCGAGGGTG 140610 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| |||||||| || ||||||||||||| |||||| Sbjct 140609 ATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 140572 >seq5 Length=2741173 Score = 104 bits (114), Expect = 5e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| || | | ||| | || || || || || ||||||||||| Sbjct 2268399 TTCTGGATGTTGTAGTCAGACAGAGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 2268340 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 || | ||||||||||| | ||| || ||||| || || || || |||||| | || Sbjct 2268339 AGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 2268280 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | | |||| || ||| || ||||| || ||||| |||||||| || |||||||||||| Sbjct 2268279 ATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAG 2268220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818242484083