Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq9 168 1e-36 seq25 159 7e-34 seq5 125 1e-23 seq3 98.7 2e-15 seq22 95.1 3e-14 >seq9 Length=1091098 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| | || || || || | || || || |||||||||||||| | Sbjct 140799 ACCACCACGCAGTCTCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 140740 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| ||||| | || || ||||| || Sbjct 140739 GAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 140680 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || ||| | ||||||||||| || | || || Sbjct 140679 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGACGACTCCAC 140620 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| ||||||| ||||| ||||| |||||||| Sbjct 140619 CTCGAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 140572 >seq25 Length=380168 Score = 159 bits (176), Expect = 7e-34 Identities = 177/231 (77%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 |||||| ||||| || || || ||||| | || || || |||||||||||||||| Sbjct 211955 ACCACCGCGCAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 211896 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || ||||||||||| || || || || |||||||| | || || || || | Sbjct 211895 CAAG-GTACGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAG 211837 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 | |||||||||||||| |||||| ||||| || ||| | ||||| || || || | ||| Sbjct 211836 GGATACCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCGATGGTATCGGACGACTCG 211778 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || ||||| || ||||| || ||||| ||||| ||||| ||||||||| Sbjct 211777 ACCTCAAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATT 211727 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| | ||||| || || || || || |||||||||||||| Sbjct 212183 ACCACCACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTAGTCGCT 212124 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || | || || || || ||||| | || || ||||| || Sbjct 212123 CAGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGG 212064 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || || ||||||| ||||| |||| || || Sbjct 212063 AATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAGACTCCAC 212004 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | |||||| ||||| |||||||| Sbjct 212003 CTCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || ||||| || || || || || |||||||||||||| Sbjct 212411 ACCACCACGCAGACGGAGGACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTAGTCGCT 212352 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || || || || || |||||||| | ||| || || || || Sbjct 212351 CAGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGG 212292 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| | || ||| | || || |||||||| | ||| || Sbjct 212291 GATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGATTCAAC 212232 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || ||||| ||||| || || | |||||| || || || ||||| Sbjct 212231 TTCCAGGGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATTTGCAT 212184 Score = 143 bits (158), Expect = 6e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || || || || || | ||| || || |||||||||||||| | Sbjct 211726 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 211667 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | || ||||| || || || || || ||||| | || || || || || Sbjct 211666 AGTGTTCTTCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGGG 211607 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||| ||||| || ||| | ||||| |||||||| | ||||| Sbjct 211606 ATACCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGAC 211548 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| ||||||| ||||| ||||| |||||||| Sbjct 211547 CTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 211500 >seq5 Length=2741173 Score = 125 bits (138), Expect = 1e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||||| || || ||||| ||||| || || || ||||| |||||| Sbjct 2268399 TTCTGGATGTTGTAGTCAGACAGAGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 2268340 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || ||||| || || |||||||| || |||||||| | || || | ||| Sbjct 2268339 AGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 2268280 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| || | || || || || ||||| ||||| ||||||| ||||| ||||| Sbjct 2268279 ATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 2268221 >seq3 Length=3980562 Score = 98.7 bits (108), Expect = 2e-15 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 230187 GAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTC 230246 ||| |||||||| || ||| ||| | || ||| || | |||||||| | | ||| Sbjct 2739308 GAACAGGAGTTCCTTACCGAGGCTCTGCCCTGCGCCCTGCTTGGCATGAACTCGAACCTC 2739367 Query 230247 ATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAA 230306 ||| ||| || ||||| ||||| || || || | |||| || || || ||||||| Sbjct 2739368 ATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCGTCGCTCTCGGCAACGAGAAG 2739427 Query 230307 GTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACT 230366 || || ||| |||||||| | || |||||| ||| || || || || || Sbjct 2739428 GTCTACCGTGCCACCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACC 2739487 Query 230367 AACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||||||| ||||| ||| |||| || || | | ||||||| Sbjct 2739488 AACTTCTTCGAGAAGCGCGTCGGCGAGTACCAGAAGGCCGGTGT 2739531 >seq22 Length=534521 Score = 95.1 bits (104), Expect = 3e-14 Identities = 404/634 (64%), Gaps = 11/634 (2%) Strand=Plus/Plus Query 299602 AACATGCTGCGCCGCCCCATCGGCGTGGGGGTACAAGGACTTCAGGATGTGTTCTTCAAA 299661 ||||||| | |||||||||||| | || || || || || |||| ||| | Sbjct 117718 AACATGCGCCACCGCCCCATCGGTCTCGGTGTTCAGGGTCTCGCCGATGCCTTCCTTGCT 117777 Query 299662 CTGAAGCTCCCATTTGACTCTCCGGAGGCCAGGGATCTTAACCGGGAAATCTTCGAGCAT 299721 ||| | || || || ||||| ||||| || | || ||| | | ||||||||| Sbjct 117778 CTGCGCATGCCTTTCGAGTCTCCCGAGGCTAGACAGCTCAACAAGCAGATCTTCGAGACC 117837 Query 299722 ATCTACTACGCTGCCGTTGAAGCGTCGGTAGAACTCGCGGAAATCCACGGGCCTCACCCC 299781 |||||| ||||||| || || || | || ||| | || || ||| || || Sbjct 117838 ATCTACCACGCTGCGCTTACTGCCTCTATGGAGTGCGCCAAGGAGCATGGCCCTTACTCC 117897 Query 299782 ACCTTCGAAGGGTCTCCTGCAAGTAAGGGCATCCTCCAATACCACTTGTGGGATGTTACC 299841 || | ||| || ||||||| |||| |||||||| ||| || ||||| |||| ||| Sbjct 117898 ACTTACGAGGGCTCTCCTGTCTCGCAGGGTATCCTCCAGTACGACATGTGGAATGTCACC 117957 Query 299842 CCCAAAAGCGATCTC---GACTGGCGAGGACTCGAGGAACGCGTAAAGAAG---GGGGTG 299895 ||| | |||||| |||||| | ||| |||| | | ||| || || || Sbjct 117958 CCC---ACGGATCTCTGGGACTGGGCCAGCCTCAAGGAGCAGATCAAGGAGCATGGTGTC 118014 Query 299896 CGGAACTCTCTACTGACCGCCCTCATGCCCACCGCAAGCACCGCCCAGATTTGCGGAAGT 299955 || ||| | | ||| ||||| |||||| || || || ||| |||||||| ||| | Sbjct 118015 CGCAACAGTTTGCTGGTCGCCCCCATGCCTACTGCCAGTACCTCCCAGATTCTCGGCAAC 118074 Query 299956 GTAGAAGCATTCGAACCCATCACTTCGAATCTATATTCCAGACGCACTCTGGCCGGTGAA 300015 || || || || ||| || || | || || | || || || ||||| Sbjct 118075 AACGAGTGCTTTGAGCCTTACACCTCAAACATCTACTCGCGTCGTGTGCTCGCAGGTGAC 118134 Query 300016 TTCCCCGTCGTTAACTCATATCTCGTCAGGGAACTCATCGAACGCGGTACTTGGAGTGAG 300075 |||| ||||| ||| | | ||| ||| ||| || |||| ||| ||| ||| Sbjct 118135 TTCCAGGTCGTCAACCCTTGGCTCCTCAAGGACCTTGTCGACATGGGTCTCTGGTCTGAC 118194 Query 300076 AAAATGAAAAACCAAATCATCGCAAACGGTGGTAGCATCCAAAAAGTAATCGGTATCCAC 300135 | ||||| |||| ||||| || | || ||| | || || | | |||| | Sbjct 118195 AGCATGAAGAACCGCATCATTGCCGAGGGCGGTTCTGTTCAGAACATCCCCAACATCCCC 118254 Query 300136 -CCGAGCGTGAAGGCTATTTATAAAACCGCATGGGATCTTTCTATGAAGAGCGTAATTGA 300194 |||| || |||||| | || || |||| ||||| | ||| || || || | | Sbjct 118255 GCCGA-TGTCAAGGCTCTCTACAAGACCGTCTGGGAGATCTCTCAGAGGACAGTCGTGCA 118313 Query 300195 CATGGCAGCAGACCGTGGAGCATTCGTAGATCAG 300228 ||||| || ||||| || || || | |||||| Sbjct 118314 AATGGCTGCCGACCGCGGTGCTTTTATTGATCAG 118347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046736879837142