Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq25 141 7e-29 seq9 140 2e-28 seq5 111 1e-19 >seq25 Length=380168 Score = 141 bits (156), Expect = 7e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| ||||||||||| |||| |||| | |||| || Sbjct 211708 ACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTTCTTCCGTCCTCG 211649 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | ||||||||||| | ||| | ||| ||||| ||| Sbjct 211648 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGG 211589 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | ||| || ||||| | || || ||||| Sbjct 211588 ATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTG 211529 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||||| |||||||| |||||||| ||||||||| Sbjct 211528 CCCGTCAGGGTCTTGACGAAGATCTGCATGATG 211496 Score = 134 bits (148), Expect = 1e-26 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | |||||||||||| | || |||||| ||||||||||| Sbjct 212189 TTGCATACCACCACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTA 212130 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| || ||| | || |||| |||||| || || ||||| | |||||||| || Sbjct 212129 GTCGCTCAGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTC 212070 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | || | || ||||| ||| ||||| ||||| | | |||||||||| || Sbjct 212069 CGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAGA 212010 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||| || || |||||||| ||||| ||||| |||||||| ||||| Sbjct 212009 CTCCACCTCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| | || |||||| ||||||||||| ||| || ||| | || ||| Sbjct 212392 ACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCC 212333 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | |||||||||||| | || | || ||||| ||| Sbjct 212332 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGA 212273 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | ||||| || |||| || || ||||| Sbjct 212272 ATCTTGGACTTGACGTTGTCAATGGTGTCCGACGATTCAACTTCCAGGGTGATGGTCTTG 212213 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| || || |||||||| Sbjct 212212 CCAGTAAGAGTCTTGACAAAAATTTGCAT 212184 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 |||||| ||||||||||| || | | || | || | || || |||||||| || |||| Sbjct 211919 CTCCTTCTGGATGTTGTAGTCAGACAAGGTACGGC-CATCCTCGAGCTGCTTGCCAGCAA 211861 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 |||| | ||||||||||| | ||| | ||| ||||| ||| ||||| ||| | Sbjct 211860 AGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACGT 211801 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | ||||| |||| || || ||||| | ||||| ||||| || || | |||||| | Sbjct 211800 TGTCGATGGTATCGGACGACTCGACCTCAAGAGTAATGGTCTTGCCGGTCAAGGTCTTGA 211741 Query 44325 CGAAGATTTGCAT 44337 ||||||| ||||| Sbjct 211740 CGAAGATCTGCAT 211728 >seq9 Length=1091098 Score = 140 bits (154), Expect = 2e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | |||||||| ||| ||||| || || |||||| ||||||||||| || | | Sbjct 140798 CCACCACGCAGTCTCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 140739 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || || |||||||| ||||| ||||| | |||||||| || | || Sbjct 140738 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 140679 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| ||| ||||| ||| | | | || ||||||| || |||||| Sbjct 140678 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGACGACTCCACC 140619 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 || | || || ||||| ||||| ||||||||||||||||| |||||||| Sbjct 140618 TCGAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATGAT 140569 >seq5 Length=2741173 Score = 111 bits (122), Expect = 1e-19 Identities = 136/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| || | || || |||| || |||||||| ||||| |||| Sbjct 2268401 CCTTCTGGATGTTGTAGTCAGACAGAGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 2268342 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| |||||||| || | || | || ||||| ||| ||||| ||| || ||| Sbjct 2268341 TCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 2268282 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||||| || |||||||| | || || ||||| ||||| ||||||||||| Sbjct 2268281 --CGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCAC 2268224 Query 44326 GAAG 44329 |||| Sbjct 2268223 GAAG 2268220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989640982741