Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq25 141 7e-29
seq9 140 2e-28
seq5 111 1e-19
>seq25
Length=380168
Score = 141 bits (156), Expect = 7e-29
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| ||||||||||| |||| |||| | |||| ||
Sbjct 211708 ACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTTCTTCCGTCCTCG 211649
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||| | ||||||||||| | ||| | ||| ||||| |||
Sbjct 211648 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGG 211589
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||| | ||| || ||||| | || || |||||
Sbjct 211588 ATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTG 211529
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
||||| |||||||| |||||||| |||||||||
Sbjct 211528 CCCGTCAGGGTCTTGACGAAGATCTGCATGATG 211496
Score = 134 bits (148), Expect = 1e-26
Identities = 170/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | ||| | |||||||||||| | || |||||| |||||||||||
Sbjct 212189 TTGCATACCACCACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTA 212130
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| || ||| | || |||| |||||| || || ||||| | |||||||| ||
Sbjct 212129 GTCGCTCAGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTC 212070
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
| || | || ||||| ||| ||||| ||||| | | |||||||||| ||
Sbjct 212069 CGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAGA 212010
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||||| || || |||||||| ||||| ||||| |||||||| |||||
Sbjct 212009 CTCCACCTCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| | || |||||| ||||||||||| ||| || ||| | || |||
Sbjct 212392 ACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCC 212333
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||| | |||||||||||| | || | || ||||| |||
Sbjct 212332 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGA 212273
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||| | ||||| || |||| || || |||||
Sbjct 212272 ATCTTGGACTTGACGTTGTCAATGGTGTCCGACGATTCAACTTCCAGGGTGATGGTCTTG 212213
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || ||||| || || ||||||||
Sbjct 212212 CCAGTAAGAGTCTTGACAAAAATTTGCAT 212184
Score = 107 bits (118), Expect = 1e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204
|||||| ||||||||||| || | | || | || | || || |||||||| || ||||
Sbjct 211919 CTCCTTCTGGATGTTGTAGTCAGACAAGGTACGGC-CATCCTCGAGCTGCTTGCCAGCAA 211861
Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264
|||| | ||||||||||| | ||| | ||| ||||| ||| ||||| ||| |
Sbjct 211860 AGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACGT 211801
Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
| | ||||| |||| || || ||||| | ||||| ||||| || || | |||||| |
Sbjct 211800 TGTCGATGGTATCGGACGACTCGACCTCAAGAGTAATGGTCTTGCCGGTCAAGGTCTTGA 211741
Query 44325 CGAAGATTTGCAT 44337
||||||| |||||
Sbjct 211740 CGAAGATCTGCAT 211728
>seq9
Length=1091098
Score = 140 bits (154), Expect = 2e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | |||||||| ||| ||||| || || |||||| ||||||||||| || | |
Sbjct 140798 CCACCACGCAGTCTCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 140739
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || || |||||||| ||||| ||||| | |||||||| || | ||
Sbjct 140738 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 140679
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| || ||||| ||| ||||| ||| | | | || ||||||| || ||||||
Sbjct 140678 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGACGACTCCACC 140619
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
|| | || || ||||| ||||| ||||||||||||||||| ||||||||
Sbjct 140618 TCGAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATGAT 140569
>seq5
Length=2741173
Score = 111 bits (122), Expect = 1e-19
Identities = 136/184 (74%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| || | || || |||| || |||||||| ||||| ||||
Sbjct 2268401 CCTTCTGGATGTTGTAGTCAGACAGAGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 2268342
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| |||||||| || | || | || ||||| ||| ||||| ||| || |||
Sbjct 2268341 TCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 2268282
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||||| || |||||||| | || || ||||| ||||| |||||||||||
Sbjct 2268281 --CGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCAC 2268224
Query 44326 GAAG 44329
||||
Sbjct 2268223 GAAG 2268220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989640982741
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |