Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq117 91.5 2e-13 >seq117 Length=965375 Score = 91.5 bits (100), Expect = 2e-13 Identities = 196/289 (68%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || || || || || | | |||| | || ||||| |||||||| || ||||| Sbjct 188529 ATGTAGGTGTCGATGAGCAGAGAGTACGTCTCAGAGTGGATGTTCTCGATCATGATCTGG 188588 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTT--CCACGTAAAATCGTTCCGCCA 16589 || ||||||||||| || || || | || || || | |||| ||||| |||||| | | Sbjct 188589 AAACCATAGAAGCAACGCGCTTCAGGAATCTGGACCTCGCCAC-TAAAA-CGTTCCACAA 188646 Query 16590 GGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAAT 16649 |||||||||||||||| || || || || || || || | | ||| ||||| | Sbjct 188647 GGTTCTCATTCACGATCCCATCGGAAGCGGCGAAGAAAGCGAGGACGTGGGAGATGAAGT 188706 Query 16650 ATTTTTCGTCAGATGTAA---GAATATGCCAATCTTTTAAATCTTTGGATATATCCACTT 16706 | |||||| | | || | ||||| || | | |||||||| | || | || Sbjct 188707 AACGCTCGTCATCGTTCAGGCGATTGTGCCAGTCGTGAAGGTCTTTGGACAAGTCGATTT 188766 Query 16707 CTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 | || | ||||| ||| ||| | ||||| || ||||||| ||| || Sbjct 188767 CCTCAGCTGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 188815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511412565300840